Gossypium raimondii: 105769476
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Entry
105769476 CDS
T04129
Name
(RefSeq) ruBisCO large subunit-binding protein subunit beta, chloroplastic
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
gra
Gossypium raimondii
Pathway
gra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105769476
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gra03019
]
105769476
03110 Chaperones and folding catalysts [BR:
gra03110
]
105769476
03029 Mitochondrial biogenesis [BR:
gra03029
]
105769476
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gra04147
]
105769476
Enzymes [BR:
gra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
105769476
Messenger RNA biogenesis [BR:
gra03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
105769476
Chaperones and folding catalysts [BR:
gra03110
]
Heat shock proteins
HSP60 / Chaperonin
105769476
Mitochondrial biogenesis [BR:
gra03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
105769476
Exosome [BR:
gra04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
105769476
Exosomal proteins of other body fluids (saliva and urine)
105769476
Exosomal proteins of breast cancer cells
105769476
Exosomal proteins of colorectal cancer cells
105769476
Exosomal proteins of bladder cancer cells
105769476
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
KH_PARP14_2
Motif
Other DBs
NCBI-GeneID:
105769476
NCBI-ProteinID:
XP_012445589
UniProt:
A0A0D2TJD0
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All DBs
Position
5:complement(10372357..10376821)
Genome browser
AA seq
609 aa
AA seq
DB search
MASSFIAMSSIGSLGFPCSKQMDKKFFNSSGRLSSFESISSSAFLGKKQKVILRRGHSSK
IRAMAKELHFNTDGSAIKKLQTGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTV
AKEVELEDPVENIGARLVRQAASKTNDLAGDGTTTSVVLAQGLITEGVKVVAAGASPIQI
SRGIEITTKALVSELKSMSKEVEDSELVDVAAVSAGNNYEVGNMIAEAMGKVGRKGIVTL
EEGSSSENSLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLIHVL
EEAIKGGYPIIIIAEDIEQEALATLVVNKLRGSLKIAALKAPGFGERKGQYLDDIAVLTG
GTVIREEVGLSLDKAEKEVLGHAAKVVLTKETTTIVGDGSTQEAVNKRVSQIKNLVEAAD
QEYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGC
TLLRLAAKVDAIKETLDNDEQKVGADIVKRALSYPMKLIAKNAGVNGSVVIEKVLSNDNP
SYGYNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVARTFLTSDAVVVDIKKPEPLPAGN
PMDNSGYGY
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggcttcatctttcattgccatgtcgtcaattggctctctaggatttccttgcagtaag
cagatggataagaagtttttcaattcttcaggtcgattgtcatcatttgaatctatttca
tcaagtgcctttctaggcaagaaacagaaggtgattttgcggagaggacattcttccaaa
attcgggctatggccaaggagctgcattttaacacggatggttctgctatcaagaaatta
caaacaggtgttaacaaacttgcagacctagttggtgttactcttggtccaaaagggaga
aatgtagttttagagagcaagtatggctccccaaaaattgttaatgatggtgtaactgtt
gctaaggaggttgagttggaagatcctgtggagaacattggtgctagattggtgagacag
gctgcttcaaagaccaatgatttggctggtgatggaaccaccacatcagttgttcttgcg
cagggtttaataaccgaaggtgttaaggtggttgctgctggtgcaagccctattcaaata
tcgagagggattgaaataactacaaaggccctggtgtctgaacttaagtcaatgtcaaag
gaggttgaagacagtgaactagtagatgtggctgctgttagtgcaggaaacaactatgaa
gttggcaatatgattgctgaagctatgggaaaagttggaagaaaaggcatagtgactctc
gaggaaggtagcagttcggaaaacagtttgtatgttgttgaagggatgcaatttgaccgt
ggttatatctctccttattttgttactgatagtgagaaaatggctgttgaatatgaaaat
tgcaagttactcctggttgacaaaaagataacaaacgcaagagatctcatccacgttttg
gaagaggctattaaagggggttacccaattataataattgcagaagacattgaacaggaa
gctcttgctactcttgttgtaaacaagctcagggggtcactaaagattgcagctctgaaa
gcccctggttttggagagcgcaaaggtcaatatcttgatgatattgcagtactcactgga
ggtactgtgataagagaagaggttggtttatcactggacaaagctgagaaggaggtccta
gggcatgctgcaaaagtggtgctcactaaggagaccacaacaattgttggtgatggaagt
acacaggaagcagtgaataagagagtttcccagatcaagaaccttgttgaggcagcagat
caggaatatgaaaaagaaaagctcaatgagagaatcgcaaagctctctggcggtgttgct
gtcattcaggttggagcacaaacagaaactgaactcaaagaaaagaaactgagagtggaa
gatgctcttaatgcaacaaaggcagctgttgaagaaggcattgtagttggtggaggttgc
accttattgaggcttgcagctaaggttgatgccataaaagagactcttgacaatgatgag
cagaaggttggagcagatattgttaaacgggcactgagctatccaatgaagttgattgcc
aagaatgctggggtcaacgggagtgttgtcattgaaaaggtgctatcaaatgacaaccct
agctatgggtataatgctgcaaccggaaaatatgaggatctgatggcagctggtattatt
gatcctacaaaagtggtaagatgttgcttggagcatgcagcttctgttgcaaggacattc
ctcacttcggatgctgtggttgtcgacatcaagaagcctgaacctttgcctgctgggaac
cctatggataattcaggttatgggtactaa
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