Gossypium raimondii: 105769505
Help
Entry
105769505 CDS
T04129
Name
(RefSeq) serine--tRNA ligase, chloroplastic/mitochondrial isoform X1
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
gra
Gossypium raimondii
Pathway
gra00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
105769505
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gra01007
]
105769505
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gra03016
]
105769505
Enzymes [BR:
gra01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
105769505
Amino acid related enzymes [BR:
gra01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
105769505
Transfer RNA biogenesis [BR:
gra03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
105769505
Prokaryotic type
105769505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
CCDC-167
TPX2
DUF724
Motif
Other DBs
NCBI-GeneID:
105769505
NCBI-ProteinID:
XP_012445645
UniProt:
A0A0D2S6W8
LinkDB
All DBs
Position
5:complement(18597358..18600998)
Genome browser
AA seq
523 aa
AA seq
DB search
MALQCRLSGATFQSLKLATIPISSSSSRFIFRTLPKTLNLALFSRHSAPKAPPFSVLIRN
LSAPAVAAAPAAETSDIKVVKPQWNAAIDFKWIRDNKEAVAVNIKNRNSNANLELVLQLY
DKMLNLQKEVERLRGERNNVANKMKGKLEPSERQKLIEEGKNLKEALTTLEEDLVKLRDE
LQIEAQCIPNLTHPDVPIGWEDSSKLRNMVGSPRKFDFPVKDHLQIGKELDLFDFDAAAE
VSGSKFYYLKNEAVMLEMALVNWTLTEVMKRGFTPLTTPEIVRSSVVEKCGFQPRGENTQ
VYSIEDSDQCLIGTAEIPVGGIHMDSIVAESALPLKYVAFSHCFRTEAGAAGTATRGLYR
VHQFSKVEMFILCRQEESDMYHEELIKIEEDLFSSLGLHFKILDMATGDLGAPAYRKFDV
EAWMPGLERYGEISSASNCTDYQSRRLGIRYRPSESPSTTSKKGKTNLAATKFVHTLNAT
ACAIPRMLVCLLENFQQEDGSVIIPHPLRPFMGGVEAIYPKSR
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggcgttacagtgtcgtttaagcggggcgacgttccaatccctaaaattggcgacgatt
ccaatctcatcttcatcgtcgcgcttcatcttccgaacacttcctaaaaccctaaacctc
gctttattttcccgccattctgctccaaaagcgcctcccttttctgttctcattagaaac
ctttcagctccggctgtggctgctgctcccgccgcagaaacctctgatattaaagttgta
aagccccagtggaatgcggcaatagatttcaagtggataagggataataaagaagccgtt
gccgttaatattaagaataggaattccaatgcaaatttggagcttgtgcttcaactttat
gataaaatgttgaatcttcaaaaggaagttgagcggcttcgaggggaaaggaataatgtt
gccaataagatgaaaggcaaattggagccttctgagcgtcaaaagctcatagaagaagga
aagaatctgaaggaagcacttacgactttggaagaagaccttgtcaaattaagagacgag
cttcagatagaagcgcaatgtataccgaatctaactcacccggacgttccaattggatgg
gaagatagttcaaagttgaggaatatggttggaagccctcgtaaatttgacttccctgtc
aaggatcaccttcaaatcggaaaggaactagatctctttgattttgatgctgctgcagag
gtaagtggttcaaaattctattacctaaagaatgaagcagtgatgctggaaatggccctt
gtcaactggacactgacagaagtcatgaaaaggggctttacaccattgacaacaccagaa
attgtcaggtcatctgttgtcgaaaaatgtggattccagccccgtggagaaaatacgcag
gtttattccattgaggatagtgaccagtgcctcattggcactgcagagattcctgtaggg
ggaattcatatggactctattgttgctgagtctgcattacccttaaaatatgtggcattt
tctcattgttttcgtactgaagctggtgctgctggtacagcaaccaggggtctctatagg
gtacaccaatttagcaaggtggaaatgtttattttatgcagacaagaagaaagtgatatg
taccatgaggaacttattaaaattgaagaggaccttttttcgtctctaggattgcatttc
aaaattttagatatggctacaggggacttgggtgctcctgcttatcgtaaatttgatgtg
gaggcatggatgccaggtttagaacgctatggcgagatatcaagtgcatcgaattgtacc
gactatcagagccgccggcttggcattcgttatcgtccatcggaatcaccctcaacaact
tccaagaagggtaaaacaaacctggctgcaaccaaatttgttcatacattaaatgcaaca
gcttgtgcaatcccaaggatgcttgtatgtttgctggagaattttcagcaagaagatggg
tctgttattattccacatccattaaggccattcatgggtggggttgaagctatatatcct
aaatctagataa
DBGET
integrated database retrieval system
