Gossypium raimondii: 105769549
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Entry
105769549 CDS
T04129
Name
(RefSeq) U-box domain-containing protein 13 isoform X1
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
gra
Gossypium raimondii
Pathway
gra04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
105769549
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gra04121
]
105769549
Enzymes [BR:
gra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105769549
Ubiquitin system [BR:
gra04121
]
Ubiquitin ligases (E3)
U-box type E3
105769549
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
HEAT_2
Neurochondrin
zf-RING_UBOX
MLKL_N
zf-C3HC4_4
zf-Nse
Arm_2
KAP
HEAT_EZ
MCAfunc
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
105769549
NCBI-ProteinID:
XP_012445704
UniProt:
A0A0D2RXF0
LinkDB
All DBs
Position
5:7278707..7283484
Genome browser
AA seq
671 aa
AA seq
DB search
MEEEKGELVRSLTDAVNQIAPIGDYRCAVKKEFCNLARRLKLLTPMFEEIRESKEQIPEE
TVKALVSLKEALVSAKELLRFGSEGSKIYLVLERDQIMHKFHEVTARVEQALSGISYENL
DISDEVKEQVELVLAQFRRAKGRVDVPDVELYEDLLSLYNKSNDAAADPDVLRRLAEKLQ
LVGIAELTQESLALHEMVSASCGDPGETFEKMSNLLKIIKDFVQTENPNLDASAREKNLP
SSSGQATTDGNHKTPVIPDDFRCPISLELMKDPVIVSTGQTYERSCIEKWLEQGHGTCPK
TQQTLSSPALTPNYVLRSLIAQWCEANGIEPPKRPGSSRPNKTTSACSPAERTKIEILLR
KLASSSPEDQRMAAGEIRLLAKRNADNRVAIAEAGAIPLLVTLLSTPDSRTQEHAVTALL
NLSICEENKGSIISFGAVPGIVQVLKKGSMEARENAAAALFSLSVVDENKVTIGASGAIP
PLVTLLSEGTQRGKKDAATALFNLCIYQGNKGKAVRAGVVPTLMRLLTEPGGGMVDEALA
ILAILSSHPEGKSAIGAAEAVPVLVDVIGNGSPRNRENAAAVLVHLCAGDQQHLAEAQEL
GVMGPLMDLAQNGTDRGKRKAAQLLERMSRFVEQQKLAQAQAGAQAQQSQSQSQSEIQQP
HPPSVAYTVDR
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagagaaaggagagctggtgcggagcttgaccgatgcggtgaaccagatagct
ccaatcggcgattacagatgcgccgtgaagaaggagttttgcaatctcgctaggagattg
aagctgttgacgccaatgttcgaggagattagagaaagcaaagagcaaatccccgaagaa
actgttaaagctttggtctcgctgaaagaagctttggtttcggctaaggagttactcagg
ttcggcagtgaaggcagcaagatttacctggttctagagagggatcagattatgcataaa
tttcatgaagtgacagctcgggtggagcaagctttgagtggaatttcgtatgagaatctt
gacatatcagatgaagttaaggaacaggtggagcttgttctagctcagttcaggagagct
aaaggaagggttgatgttccggatgttgaactgtacgaggatctattatcactctacaat
aaaagcaacgatgctgcagcagatccagatgttctaaggagattagccgagaagttacaa
ttggttgggatagctgaacttacgcaagaatcactagctctacatgagatggtttctgcc
agttgtggagatcctggggaaacatttgaaaagatgtcaaacttactaaagataatcaag
gattttgtacagacagaaaatcctaatttggatgcttctgcaagggaaaagaatcttcct
agtagtagtgggcaagcaaccactgatggaaatcataagactccagttataccagatgat
ttccgctgtccaatatccctggagttgatgaaggaccctgtcattgtttccacagggcag
acttatgaacgttcttgcattgagaaatggctggagcaaggtcatggaacatgtccaaag
acacaacagaccctcagtagccctgctcttacgcccaattatgtattgcgtagtctaata
gctcaatggtgtgaggcaaatggcattgagccgcctaaaagacccggtagttctcgaccc
aataaaaccacatctgcctgctcacccgctgaacgtaccaagattgaaattctcctccgt
aagcttgcatccagcagtcctgaagatcaaagaatggctgcaggtgaaatccgtcttctt
gccaaacgaaatgcagataatcgtgtggccattgctgaagctggggccatacctctcctt
gtgaccctcctttcgacacctgattcacggacccaagaacatgctgtaacagcacttctt
aacctttccatttgtgaagagaacaaaggaagtatcatatcttttggagcagttcccggt
atagtccaggtgcttaagaagggaagcatggaagctagagagaatgcagcagctgccctc
ttcagcctctcagtagtggatgaaaataaggtgacaattggtgcctcaggagcaattcct
cccctagtgacattgctaagtgaaggcacacaaagggggaaaaaagatgcagcaacagca
ctctttaatttgtgcatttaccaagggaacaagggaaaagcagtgagagccggagttgtc
ccaacattaatgcgtttgttgacagaacctggaggaggaatggtggatgaggctttagcc
atacttgcaatactctcaagccacccggaaggtaagtctgccataggagcagcagaggca
gtgccagttttggtagatgttattggtaatggatctcctaggaatagggagaatgcagct
gcggttttggtgcacctctgtgccggagaccaacagcatttagcagaggcccaggaacta
ggagtgatgggtcctttgatggacttggctcaaaatggtacagatagggggaagcggaag
gctgctcaattgcttgagcgcatgagcaggtttgttgagcagcaaaagcttgcacaggcg
caagctggggcccaagctcaacagtcccagtctcagtctcaatctgagattcaacaacca
cacccaccctctgtggcatacactgttgatagatga
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