Gossypium raimondii: 105769563
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Entry
105769563 CDS
T04129
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
gra
Gossypium raimondii
Pathway
gra03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105769563
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gra03021
]
105769563
03036 Chromosome and associated proteins [BR:
gra03036
]
105769563
Transcription machinery [BR:
gra03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
105769563
Chromosome and associated proteins [BR:
gra03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
105769563
PBAF complex
105769563
GBAF(ncBAF) complex
105769563
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
105769563
NCBI-ProteinID:
XP_012445730
UniProt:
A0A0D2QWK6
LinkDB
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Position
7:complement(731122..733857)
Genome browser
AA seq
534 aa
AA seq
DB search
MSMNGNNPPKNLSSSPFGNAGMVPPPMPGNPAFSQAQLSAGFQAQYQLSQAQALAQAQSK
AQAQAQAHAQLQAHLQAQGLSLNQAQNAGFGTLGSSSPSMSTPGSASAKRILQRPPMRPP
GVPMMNTMSPLRTMELTDAARRKKQKLPEKQLQDRVAAILPESALYTQLLEFEARVDAAL
ARKKVDIQEALKNPPCVQKTLRIYVFNTFANQIKTIPQKPNAEPPTWTLKIIGRILEDGV
DPDQPGFVQRTNPLYPKFSSFFKRVTISLDQRLYPDNHIIIWEHARSPTPNEGFEVKRKG
DKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIWHYVKARKLQSPNDPTS
FNCDAQLHKVFGEEKVKFTMVPLKISQHLSPPPPIHLEHKVKLSGNSPVGNVCYDVLVDL
PFPIQRELSALLSNAEKSKEIETCDEAICAAIRKIHEHRRRRAFFLGFSQSPVEFINALI
ESQSLDVKLVAGEASRSSEKERRSDFFNQPWVEDAVIRYLNRKPAAGSDAPGSI
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgaatggcaataatcccccgaagaacctatcttcgtcgccctttggtaatgcg
gggatggtgcctcctcctatgcctggaaaccctgcattctcacaagctcaactcagcgct
ggttttcaagctcagtatcagctatcccaagctcaggcccttgctcaggctcagtcgaaa
gctcaagctcaagctcaagctcatgcccaactccaagcacacttacaagcccaaggtttg
tcccttaaccaggctcagaatgcgggctttgggacattaggttcgtcttcaccctccatg
tctactcctggcagtgcaagtgcaaagaggatccttcaaaggccccccatgcgccctcct
ggtgttcctatgatgaacacaatgtcacctttgagaacaatggaacttacagacgctgca
cgtagaaagaagcagaagcttcctgagaaacaactacaggatagagtggcagcaattctt
cctgaatctgctttgtatacccagcttcttgagtttgaggcacgtgttgatgctgcatta
gctaggaaaaaagttgacatccaggaagcacttaagaacccaccttgtgttcagaaaact
cttcgaatatatgttttcaacacttttgctaatcagattaagacaattccgcagaagcct
aatgcagagcctcctacgtggacccttaagattattgggagaatcctggaagatggagta
gatccagatcaacctggatttgttcaaagaacaaatcccttatacccgaagttttcatct
ttcttcaagagagtgacaatttcattggaccaaagactatatccagataatcatatcatt
atatgggagcatgctcgatcaccgacacctaatgaaggttttgaggtgaagagaaaaggg
gataaggagttcactgtgaacatacggttggaaatgaattatgtacctgagaaatttaag
ctttcttctgctttaatggaagtccttggtattgaagttgatacgcgccccagaattatt
gctgcaatttggcattatgtgaaggctagaaaacttcagagcccaaatgatccgacttcc
tttaattgtgacgcacaacttcataaagtttttggggaagaaaaagtaaaatttaccatg
gttccactgaagatatcacagcatttgtctccaccaccacctatacatttggagcataag
gtcaagctttcggggaatagtcctgttgggaacgtatgctatgatgtgttagttgatttg
ccctttcccatacagagggaattgtctgctcttttgtcaaatgcagagaagagcaaagag
atcgagacctgtgatgaagcaatatgtgctgccataaggaaaattcatgagcaccgtaga
aggcgtgccttctttctaggtttcagtcaatcaccagtggagtttattaatgctttaatt
gagtctcagagcctggatgtgaaactggtagccggggaagctagtcgaagttctgaaaaa
gagcgacgatcagatttttttaaccaaccatgggttgaagatgctgttatccgttatttg
aatcgcaagccagctgctggaagtgatgcaccaggaagcatatga
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