Gossypium raimondii: 105769570
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Entry
105769570 CDS
T04129
Name
(RefSeq) isoamylase 3, chloroplastic isoform X2
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
gra
Gossypium raimondii
Pathway
gra00500
Starch and sucrose metabolism
gra01100
Metabolic pathways
gra01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
105769570
Enzymes [BR:
gra01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
105769570
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
CBM_48
ISOA1-3_C
Isoamylase_C
DUF5696
Motif
Other DBs
NCBI-GeneID:
105769570
NCBI-ProteinID:
XP_012445737
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Position
5:complement(18558167..18569021)
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AA seq
774 aa
AA seq
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MLHSSFISKSNGTKFPSFASANATLSSFRASSHFQMGLKWSRIAFSSSSGQRLSSKARSR
VKHRTANVYGRQARERVLEEEAPEMAEATPSFKIFPGQAFPLGASEVDNGINFAIFSQHA
TAVTLCLSLPQRGELDMLAGGMIEFSLDPNLNKTGDIWHICIEDLPRSNVLYGYRIDGPK
DWDKGHRFDSNNVLIDPYAKLVEGRRNFGDAKHKLSKFLGTYDFDSLPFDWGEDYKLPNI
PERELVVYEMNVRAFTADESSCLDQDIRGTYAGLIEKIPHLLELGINAVELLPVFEFDEF
EFQRRPNPRDHMINTWGYSTINFFAPMSRYGSGGGGAVSASREFKEMVKALHGAGIEVIL
DVVYNHTNEADDKHPYTTSFRGIDNKVYYMVDLNNKGQLLNFSGCGNTFNCNHPVVMELI
IDSLRHWVVEYHIDGFRFDLASVLCRGTDGSPLGAPPLIRAIAKDATLSRCKIIAEPWDC
GGLYLVGSFPNWDRWAEWNGKYRDDLRRFIKGDPGMKGAFATRVSGSADLYRKNKRKPYH
SVNFVIAHDGFTLRDLVSYNFKHNEANGEGGNDGSNDNFSWNCGFEGETDNVDIIALRFR
QMKNFHLALMVSQGVPMMLMGDEYGHTRYGNNNSYGHDTALNNFQWQQLNARKSDHFRFF
SEVIHYRQKHRVFSHENFLDRSDVTWHEDNWDNPDSKFLAFTLHDKGGGEIYLAFNAHDF
FVKVSIPPAPPKRRWFRVVDTNLASPDDFVGEGVPGIGSTYNVAPYSSILLEAK
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgctacactcatcttttatatccaaatcaaatggtaccaagtttccttccttcgcttcc
gcaaatgcaaccctttcttccttccgagcttcttctcattttcaaatgggattgaagtgg
agtagaattgcattcagtagcagcagcgggcaacgactttcaagtaaggcaaggagccgt
gtcaagcataggacagcaaacgtctacgggcgtcaggcaagagaacgtgtacttgaggaa
gaggcccctgaaatggcagaagccacaccatcctttaaaatttttccaggtcaggcattt
ccattaggtgcatcagaagttgataatgggatcaattttgccattttttcacagcatgcg
actgcagttacactttgcttatcacttccccagaggggagaacttgacatgctggctggt
ggaatgatcgaattttctttggaccctaatctcaacaaaactggagatatttggcacata
tgcattgaggatttgcctcggagcaatgtcctctatggttatcgcattgatggtcccaaa
gattgggacaaagggcatcggtttgacagcaacaatgttcttatagatccttatgcaaag
ctagtagaaggtcgtcgaaattttggagatgcaaagcataaattatcaaaatttcttgga
acatatgattttgatagcttgccttttgactggggagaagactacaagctcccaaatatc
cccgagagagaacttgtcgtatatgaaatgaatgttcgtgcatttacagctgacgaatct
agttgcttggatcaagatatacggggcacttatgctggtctgatagagaagatcccacac
cttctagaacttggaatcaatgcagtggagttgcttcctgtctttgagtttgacgagttt
gagtttcaaaggcgccccaatcccagagatcacatgatcaatacatggggttactcgacg
ataaatttctttgctcctatgagtcgttatggtagtggtggtggaggagctgttagtgct
tctcgggagttcaaagaaatggttaaagccttgcatggggctggaattgaggtgattttg
gatgttgtttataatcacactaatgaagctgatgataagcatccttataccacttcattt
cgtggcatagataacaaggtttattacatggtggacttaaacaacaaaggtcaactgcta
aacttctctggctgtgggaatacattcaactgcaatcatcctgttgtcatggagctcata
attgacagcttaagacactgggttgttgaatatcacatagatggatttcggtttgacctt
gccagtgttctttgtcgaggcacagatggttctcctcttggtgctcctccacttatcagg
gctattgcgaaagatgctaccttatcaaggtgcaaaattattgctgaaccttgggattgt
ggagggctctatcttgttggcagttttcctaactgggacaggtgggctgagtggaatgga
aagtaccgtgatgatctaagaagatttataaagggcgatcctggtatgaaaggagcattt
gcaactcgcgtctctggatctgctgacctgtaccggaaaaataaacgcaagccgtaccat
agtgttaattttgtcattgcacatgatggcttcaccctccgtgatcttgtttcatacaat
tttaagcacaatgaagccaatggagaaggtggaaatgatggaagcaatgacaactttagt
tggaattgcgggtttgaaggagaaactgacaatgttgatattattgccctgcgtttccgg
caaatgaaaaacttccatttggcattgatggtatcacagggagttcctatgatgctaatg
ggagatgaatatgggcatacacgatacggtaataacaacagttacgggcatgatactgct
cttaataatttccagtggcaacagttgaatgcaaggaagagtgaccacttcaggtttttc
tctgaggtgatacactatcggcaaaagcatcgagtattttcccatgagaattttctcgac
agaagtgatgtgacttggcatgaggataactgggacaacccagacagcaaattcctcgca
tttacgcttcatgacaaaggtggtggagaaatctatctcgcattcaatgctcatgacttt
ttcgttaaagtttctatacccccagcgccaccaaagaggcgttggttccgtgtggtggac
accaatcttgcgtcgccggatgattttgtgggtgaaggagtccctggaattggcagcacc
tataatgtggctccatactcttccattcttcttgaagctaaataa
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