Gossypium raimondii: 105769579
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Entry
105769579 CDS
T04129
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 23 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gra01002
]
105769579
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gra04121
]
105769579
Enzymes [BR:
gra01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
105769579
Peptidases and inhibitors [BR:
gra01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
105769579
Ubiquitin system [BR:
gra04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
105769579
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
105769579
NCBI-ProteinID:
XP_012445753
UniProt:
A0A0D2RUQ2
LinkDB
All DBs
Position
5:4096870..4102392
Genome browser
AA seq
941 aa
AA seq
DB search
MEATVISCSELRIEAETEECSDLGNFSSASGSTSVGLSKRRIVFHPARKPLNGFNDCADE
DFKIETLNPGPDPMRVNGVRSAQVGATGWKVDASDIWENGLDPVLSLRTTFRKIGAGLEN
LGNTCFLNSVLQCLTYTEPLVAYLQSGKHQNSCHIAGFCALCAIQKHVSRALKSTGRILA
PNDLVSNLRCISRNFRNSRQEDAHEYMVNLLESMHKCCLPSGVPSESPRAYEKSLVHKIF
GGRLRSQVKCLQCSYCSNTFDPFLDLSLEIVKADSLLKALKNFTTAELLDGGERQYQCLR
CKQKVRAIKQLTVYNAPHVLTIHLKRFQAHNLGQKIDRKVEFGPTIDMKPFVSGSNEGYL
KYTLYGVLVHRGWSTHSGHYYCFVRTSSGMWYTLDDNRVFQVSEKTVLEQKAYMLFYVRD
RRNTATKNSVDILQRDNVKASVDGKSIFNQNPGEHVQTVPIQNKLSAAVPQKDIINGGLS
KGTIMKEVPSQQNNVQLMEEGLVLKKEAILPSFDVPLLKDPSKASASNLIHGENLQPSAG
SVVGNVASSNIENPTVSTGAKDSYCNESGNCKREFGVPEMVPLNCGGLLKSCTDKIVTKE
TLQKINLASNIEVSNTVTLDDSIDKAVKKAPGEASKNVHAIRSPNKPHCDSNKIGDVSYH
SSRGKSLNEKGDDNSQKTISRSPSSMPNGSLETEDPEYAPCRKSKKKHLKRKPKNMPLGL
KSKFFMASLLMHGKKKRKRSKEKDCCSLDLGPSTCEKFSTITLGSVHGRKRTADDTTQKN
GDNSASSLMNTVDVASKERICENGTVLATDQHVGSSSGSVSEANRHNSRETDSLKHHKTG
ASPHRHVLTQCLGEAVVPRWDDIGLTSPMQTAESNGMDDLEIGYVPDEWDEEYDRGKRKK
IRQNKHQFGGPNPFQQVATKKTQLKKDKWDRSSSGNRPFRI
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggaagcaacggtgattagttgctcggaattgagaatcgaagctgagactgaggagtgt
tcggatcttgggaacttttcatcggcttcaggttctactagtgttggcctgtctaagaga
aggatcgtattccatccagcgaggaagccccttaatgggtttaatgattgtgcggatgag
gattttaaaatcgagactctaaaccctgggccggatccgatgcgggtaaatggggtgcgg
tcggctcaagtgggtgctacaggatggaaggttgacgcatctgatatttgggagaacggg
ttggatccagttctcagtttgaggactacttttcgcaaaattggtgctggtttggagaat
cttgggaacacttgttttcttaattcagtattgcaatgcctgacgtacacagagccttta
gtagcttacctacaaagtggcaagcatcaaaattcttgccacattgctggattttgtgcc
ttatgtgctattcagaaacatgttagccgtgctctaaaatcaactgggaggatattggcg
ccaaatgatcttgtctcaaacctgcgatgcatatctagaaacttccgaaattctagacag
gaagatgcacatgagtacatggtaaacctgctggaatccatgcacaagtgctgcttacct
tcaggagtaccaagtgaatctcctagggcttatgagaagagtttggtgcacaagatcttt
ggtggtcgccttcgcagtcaggtgaaatgcttgcaatgttcttactgctccaacacgttt
gatcccttccttgatttaagtcttgaaatagttaaggcagattccttgcttaaagcactt
aaaaacttcactactgcggagctcttagatggaggggagaggcaatatcaatgcctgcgc
tgcaagcagaaagttagggctatcaaacagctcacagtttacaatgcaccgcatgtactt
acaatccatctaaagagatttcaagcacataatttggggcaaaagattgacaggaaagtt
gaatttggtccgaccatagacatgaagccttttgtcagtggttccaatgaaggatatttg
aagtacactctttatggcgttctggttcatcgcggatggagcacacattctggccactat
tactgttttgtccgcacatcaagtggcatgtggtacacccttgatgacaacagggttttc
caggtcagtgagaagactgttttggagcagaaggcttacatgttgttttacgtccgtgac
agaagaaatactgctacaaaaaattctgttgatattcttcagagagataatgtaaaagca
agtgtggatgggaagtctatttttaatcagaatcctggggaacatgtgcaaactgttcca
attcagaacaagttatctgctgctgtgcctcagaaggatatcattaatggtggcttatca
aaggggacaatcatgaaggaagtgccatcccagcaaaacaatgtgcaactaatggaagaa
gggttagtgctgaaaaaggaggccattttgccctcttttgatgtgccattattgaaggac
ccatcaaaagcatctgcttcaaacctgattcatggtgaaaacttgcaaccatcagcaggt
tctgtggttggcaatgttgcaagttctaatattgaaaatcctactgttagtactggtgcc
aaagatagttactgcaatgagagtggaaactgcaaaagggaatttggagtcccagagatg
gtaccactgaattgtggtggtcttctgaagtcgtgcactgataagattgtaactaaagag
acattgcagaagattaatcttgcttcaaacattgaggtttcaaacactgtcacattggat
gattcaatcgataaagcagtgaagaaagctcctggtgaagcatctaagaatgttcatgcg
attaggtctccaaataagccacattgtgacagtaataagattggagatgtttcctaccac
agtagtaggggtaagtcattgaatgagaaaggtgatgataatagccaaaaaaccatttcc
agatcaccttcgagcatgccaaatggatcactggagactgaagatcctgaatatgcaccc
tgtagaaaatcaaagaagaagcatctgaagcgtaagcctaaaaatatgcctcttggctta
aaatcaaaatttttcatggcttctctactcatgcatggcaagaagaaacgtaaaaggagc
aaggaaaaggattgttgttcattagacctggggccgtctacatgtgagaaattcagcaca
atcacattaggttcggttcatgggaggaaaaggacagctgatgatactactcagaaaaat
ggtgacaatagtgccagttccttgatgaataccgtagatgtagcatctaaagagaggatt
tgtgagaatggtactgttcttgctactgatcaacatgtaggcagcagttctggctcagtc
tcagaagcaaaccggcataactcaagagaaactgattctttgaaacatcacaaaacaggt
gcatctcctcataggcatgtgcttacccaatgtctaggggaggcagttgttcctagatgg
gatgatataggcttaacctcacccatgcagactgcagaatcaaatggtatggatgatctt
gaaattggatatgtaccggatgaatgggatgaggagtatgaccgtggtaagaggaagaag
ataagacaaaataagcatcagtttggtggtccaaatcctttccaacaagttgccaccaag
aaaacacagttaaagaaggacaaatgggaccgttctagctctggaaaccgaccattcagg
atatga
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