Gossypium raimondii: 105769590
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Entry
105769590 CDS
T04129
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
KO
K14411
RNA-binding protein Musashi
Organism
gra
Gossypium raimondii
Pathway
gra03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105769590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gra03019
]
105769590
Messenger RNA biogenesis [BR:
gra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
105769590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
105769590
NCBI-ProteinID:
XP_012445780
UniProt:
A0A0D2TS07
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All DBs
Position
5:complement(14244148..14248575)
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AA seq
474 aa
AA seq
DB search
MEMELGKLFIGGISWGTNEDRLREYFQTFGEVVEAVIMKDRATGRARGFGFVVFADPAVA
ERVVMKEHMIDGRTVEAKKAVPRDDQNMLNKNNISTLGSPGPSRTKKIFVGGLASTVTES
DFKRYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVDKVLQRTFHELNGKMVEVKR
AVPKESSLGPNRNQLGGYNFGLSRVNSFLNGYMQGYNTNSVGGYGVRMEGRSSPGTIGHN
GFSPLSHGYGMGLNFESNSSPSSGWNSNLGSNLSYGRGLNTSFNGNSNRFASPFGYGVGS
GGNDSVLNSAGRNVWGNGCLNYATNSTNSSAMLGPGSGKTGVSSLGSIGPLWDSSPKSGQ
GGGVASAYNGSNLRYGSGDFGIASGGIGHGRSSGTSVVQVSSHGGYDRAYADIYDNGSFF
EDSTWQSSPLDLEQSSSFDFGLGNTTSDVMSNSSAGYIGGYNVTNRQSNGGIAT
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggagcttggcaagctattcatcggtgggatttcttggggcacaaatgaggac
cgtcttagagagtattttcaaacttttggggaagttgtggaagctgtgataatgaaggat
cgggctaccgggcgtgcccgtggattcgggtttgtcgtttttgctgatccggctgttgca
gaaagggttgtgatgaaagagcatatgatagacggtagaactgttgaggcaaagaaggca
gttcctagggatgaccagaacatgttgaacaaaaataatattagcacacttggatcacct
ggtccttctcgcacaaaaaagatttttgtaggaggcttggcatccacagtcactgagagt
gactttaagaggtactttgatcagttcggtacaattacagatgttgttgtgatgtatgat
cacaacactctgaggccacgaggttttggattcataacttatgattcagaggaagctgtg
gataaagtcttgcagagaacatttcatgaactcaacgggaaaatggttgaggtcaagcga
gctgtccccaaagaatcatctttaggtcctaaccggaaccagttaggtgggtataacttt
ggcctcagtagagtcaatagcttccttaacgggtacatgcagggttataatactaattca
gtcggtggttatggtgttagaatggaaggtagatctagtccgggtactattggtcataat
gggttttctccattgagtcatggttatgggatggggctgaattttgagtcaaattcgagt
ccaagctctggatggaactcgaaccttggttctaacctgagctatggacggggattgaac
acctcatttaatggaaattcaaacagatttgcaagtccctttgggtatggtgtgggcagt
ggaggaaatgattctgtcttaaactcagctggtcgaaatgtgtggggaaatgggtgtctt
aactatgctactaactccacaaactctagtgctatgttggggcctggaagcgggaaaaca
ggtgtgagttctttgggcagcattggaccactttgggattcctctcctaagtcaggtcaa
ggtggaggtgttgcttctgcttacaatggtagcaatcttaggtatggaagtggcgatttt
ggtattgcatcgggagggataggccatgggagaagcagtggaaccagtgttgtccaggta
tcatcccatggtggttatgacagggcttatgctgatatttatgacaatggttcatttttc
gaggattctacttggcaatcttcacccttagacctagagcagtctagttcttttgatttt
ggtctgggaaatacgacttcagatgttatgtctaatagctctgctggttacattggcggt
tataacgttacaaataggcagtcaaatggagggattgccacatag
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