Gossypium raimondii: 105769768
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Entry
105769768 CDS
T04129
Name
(RefSeq) scarecrow-like protein 1
KO
K27748
scarecrow-like transcription factor PAT
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gra03000
]
105769768
Transcription factors [BR:
gra03000
]
Eukaryotic type
Other transcription factors
GRAS
105769768
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Motif
Pfam:
GRAS
DUF7529
Inhibitor_I10
Motif
Other DBs
NCBI-GeneID:
105769768
NCBI-ProteinID:
XP_012446082
UniProt:
A0A0D2TV74
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Position
5:20692330..20695542
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AA seq
554 aa
AA seq
DB search
MSLVTSTEPAITACRNTKLYSVQGSGDSSGLSTQMFGSDKHKPRCITDSYSSESYEKLFV
GSPSEELMHPSSSDVSESSIRQQDVSSYQPRDYLEVQSADTLDDDTDKMKLMLQELERDL
LGDNDVDVGDMFGTGLNMEIDGEWSGPVRTEPIHEPPKESSSSESNLSSISSNKEASHFS
SRTPKQMLIECAAVLAEGNIEGASAIINELRQLVSIHGDPPQRIAAYMVEGLAARVAASG
KYLYKALRCKEPPSSDRLAAMQILFEVCPCFKFGFMAANGAIIEAFKAEKRVHIIDFDIN
QGSQYITLIQSIAKLPGKPPHLRLTGVDDPDSVQRLNGGLQIIGLRLEKLAEVLGVSFEF
QAVASRTSLVTPSMLDCRPGEALVVNFAFQLHHMPDESVSTINQRDQLLRMVKSLNPKLV
TVVEQDVNTNTSPFFPRFIEAYSYYSTVFESLDVTLPRESQDRMNVERQCLARDIVNIVA
CEGEERIERYEVAGKWRARMTMAGFTSCPMSPNVIDMIRKLIREYCDRYKLKEDLGALHF
GWEDKSLIVASAWR
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgtctttagtaacatccacagaaccagctatcacagcatgtagaaatacaaagctctat
tcagtacagggtagcggtgacagttctggcttgtccactcaaatgtttggctctgataag
cataagcctagatgcattactgattcatacagcagtgagagctatgaaaagttgtttgtt
ggctctccttcggaagagcttatgcatccatctagttctgatgtttcagaaagttcaatt
cgccagcaggatgtctcttcttaccagccaagagattacttggaagttcaaagtgcagat
acattagacgatgatacagataagatgaaactgatgcttcaagaactggagagagatctg
cttggtgataatgatgttgatgtaggtgatatgtttggcactggtctgaacatggaaata
gatggtgaatggtccggtcctgtccggacagaaccaattcatgaaccaccaaaggagtca
tcttcctcagaatctaatctcagtagcatcagcagcaacaaagaggcatcacatttttca
tctaggactcctaagcaaatgcttatcgagtgtgctgctgtactcgcggaaggcaacatt
gaaggagcttcagccataataaatgagcttcgccagctggtgtcgattcatggagatcct
cctcagagaatcgcagcctacatggttgaaggtcttgctgctcgcgtggctgcatctgga
aaatatctttataaagctttaagatgcaaagagcccccttcttctgataggcttgcagcc
atgcaaatcctctttgaggtgtgcccttgttttaaattcggatttatggcagcaaatggt
gcaattatagaggcatttaaagctgaaaagagggtacatataatagatttcgatataaat
caaggtagccaatatattacactgattcaatcaattgctaagttgcctggtaagccacct
cacttgaggttaactggggttgatgatcccgactccgttcaacgtcttaacggaggtctt
caaatcattggactaagactcgagaagctagctgaagtacttggcgtttcattcgagttt
caagctgttgcctcaaggacttcacttgtcactccatctatgttggattgccggcctgga
gaagcacttgtagtgaacttcgcatttcagctgcaccacatgcctgatgagagtgtttca
acaataaatcagcgagaccagcttcttcggatggttaagagcttaaatccaaaacttgtt
actgtcgttgagcaagatgtgaacacaaacacctctccctttttcccaaggttcattgag
gcctacagttactactccactgtcttcgagtccctggacgttacacttccaagggagagt
caagacaggatgaatgttgaaaggcagtgcttggcacgggacatagtcaacattgtcgct
tgtgagggagaggaaagaatagagcggtacgaagttgcaggaaagtggagggcaaggatg
acgatggctggcttcacttcttgtccaatgagtccaaatgtgatcgatatgatccggaag
ctaatcagggagtactgtgacaggtacaagctgaaggaggatttaggagcacttcatttt
ggttgggaagacaaaagcttgattgttgcttcagcatggaggtag
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