Gossypium raimondii: 105769846
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Entry
105769846 CDS
T04129
Name
(RefSeq) preprotein translocase subunit SCY1, chloroplastic
KO
K10956
protein transport protein SEC61 subunit alpha
Organism
gra
Gossypium raimondii
Pathway
gra03060
Protein export
gra04141
Protein processing in endoplasmic reticulum
gra04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
105769846
04141 Protein processing in endoplasmic reticulum
105769846
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
105769846
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gra04131
]
105769846
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
gra02044
]
105769846
Membrane trafficking [BR:
gra04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
SEC61 complex
105769846
Secretion system [BR:
gra02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
105769846
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecY
Motif
Other DBs
NCBI-GeneID:
105769846
NCBI-ProteinID:
XP_012446216
UniProt:
A0A0D2TH01
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Position
5:658002..661524
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AA seq
542 aa
AA seq
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MLITVREASFWPLTFNLSSFSSPKPSPILKNSVCRASLSVHPKPTSNSQSWDLSLLSNSQ
KGSVFDPLGINPDESSGLNGVWDSFLSLLTPTFESTSGTRKEKSSSARGVAAAIEDSSIE
FGDFFKGPLPGKFLKLLAFLALSRLGVYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGI
GRLGICSLGIVPFINAQIVFQLLAQVYPKLQDLQKREGEAGRKKILQYTRYASVGFAIVQ
AIGQVLYLRPYVNDFSTQWVLSSVTLLTLGAVLTTYIGERISDLKLGNGTSLLIFTNILS
YLPASFGRTVAQAYQDGNYIGLVAIIISFFLLVLGIVYVQEAERKIPINYASRYTSRSGG
LQKSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGISVLKKAAVALNPGGSFYLPTNI
LLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLA
ILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIEFYDFDKY
SP
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgttgataacggtcagggaagcttctttttggcctctcaccttcaacctctcctctttc
tcttctcctaagccttctccaatactcaaaaactctgtttgcagagccagtttaagtgtt
catccaaaacccacctccaattcccaatcatgggaccttagtcttctttctaacagccaa
aaaggatctgtttttgatcctttgggtatcaacccagacgagtcttcaggtttaaatggt
gtttgggatagttttctatccttgttaacacctacatttgagagtacctcaggtactaga
aaggagaaatcttcttcggctagaggagtggcagctgcaattgaggacagttccattgaa
tttggggatttcttcaaaggcccattaccaggaaaatttctcaagcttttagcatttttg
gctttatctcgtcttggagtttatatacctctgggaggggttaaccgagaggctttcgtt
ggcaatttggatcagaacagtctactaagcactttggattcgttctccggaggaggcatt
ggtagacttggtatatgctcccttggtattgttccttttattaacgctcaaatcgtgttt
caactcctcgcccaagtttaccctaaattgcaagatcttcagaaaagagaaggtgaagct
ggaagaaagaaaattttgcaatatactagatatgcctcggttggttttgctatagtacag
gcaattggccaagtactttaccttcgtccatatgtcaacgatttcagcacgcagtgggtt
ctctcctctgttactttattgacacttggtgctgtactaacaacatatattggggaacgg
atttctgatctaaagcttggaaacggcacatctcttttaatatttacgaatattctatcc
tacttgcctgcatcttttggaaggacagttgcacaagcatatcaggatggtaactacatt
ggacttgttgccatcattatctcgttcttcctgctggtacttggcatcgtttatgttcag
gaagcagagaggaagattccaatcaactatgcctcaagatacaccagcagaagcggagga
cttcaaaaatctgcttacctaccctttaaggtaaacagttctggagtgatgccgattata
ttttctacatcatccctagctcttcccggtactttagcacgatttactggcatatctgtt
ctaaagaaggctgcagttgctttgaatcccggaggttctttctaccttcctaccaatatc
ttgttgatagccttttttaattactactacactttcctacaactggaccctgatgatgtt
agtgaacaactgaagcggcaaggtgcttcgattccactggtccgacctggtaaaagtaca
gcagcatttttaaagacggttcttagtcggatatcggttctgggttcagtatttttagca
atcttggcagctggtcctgccgtgatcgagcaaaccacacacttgactgcattccgagga
tttgcgggcacttcagttcttattcttgtgggatgtgcaactgatactgcaagaaaagtt
caagcagagattatatcccagaagtacaagaacatagagttttacgacttcgacaagtat
agcccgtaa
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