Gossypium raimondii: 105769931
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Entry
105769931 CDS
T04129
Name
(RefSeq) RNA-binding KH domain-containing protein PEPPER
KO
K21444
poly(rC)-binding protein 3/4
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gra03019
]
105769931
Messenger RNA biogenesis [BR:
gra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
105769931
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
MOEP19
KH_Vigilin
Motif
Other DBs
NCBI-GeneID:
105769931
NCBI-ProteinID:
XP_012446358
UniProt:
A0A0D2Q600
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Position
5:250954..256182
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AA seq
419 aa
AA seq
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MEIANATENGSAKTEPPTTTAQNPSEAASLNPAIEKWPGWPGHCVFRLIVPVLKVGSIIG
RKGELIKKMCEETRARIRVLDGALGTADRIVLVSGKEEPEALLSPAMDAALRVFKRISGL
PDNERDPKAARAAFCSIRLLVAYTQAINLIGKQGSVIKSLQESTGASVRVLPADELPSYA
AAYERIVELQGEALKVLKALEEVVGHLRKFLVDHSVLPLFEKTDLQAETRAEITASQSGI
GIDLPVTARGDSLFLEHETQLESRIPSSGISFYTQDPTLSAIYSSSGLVRSVVPIVTQIA
QTMQIPFSYAEDIIGIGGANIAHIRRTSGAVITVQESRGMSDEITVEIKGTSTQVQLAQQ
LIQEFMSNHKDPVTSGNYRDSSYRSSYSQMGSTSSLSTQPYGGYGGSSSNVGGYPTFRL
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggaaattgcaaacgccacggagaacggttcggccaagactgagcctcccaccaccacc
gcccaaaacccttcagaagcagcttcccttaatcctgcaatagagaagtggcccggatgg
ccaggccactgcgtgtttcggctgattgtgccagttttgaaagtggggagcataattggc
cgcaaaggggagctcattaagaagatgtgcgaggaaacccgcgctcgcatccgcgtcctt
gatggtgctcttggcactgctgatcgcattgtgctagtatcagggaaggaagaaccagag
gcacttctttcccctgcgatggatgctgctctaagagttttcaaacgcatctctgggtta
cctgataacgaaagggatcctaaagcagctagagctgcattttgttcaatccgtttgctg
gtagcatatacacaagcaattaatttaattggaaaacagggctctgtaattaagtcatta
caagagagcacaggtgcatctgtgagggtgttgccagcagatgaattgccatcttatgcg
gcagcatatgagaggattgtggagttgcagggagaagccctgaaggttcttaaagctctt
gaagaagtggtggggcacctgagaaaatttttggttgatcacagtgttcttcctcttttt
gaaaaaacggatcttcaagcagagactcgggctgaaattacggcttctcaaagtggaatt
ggtatcgatcttcctgttacagcaagaggggattctttgttccttgaacatgaaacacag
ttggagtcacgaattccatcttctggaatttctttctatacacaggatcccacgctttcg
gcaatatattcttcttctggacttgttcgatctgttgttcctattgtcacacagattgct
caaacaatgcaaataccattttcttatgccgaggacatcattgggataggcggagctaat
attgcacatattcgccgcactagtggagctgtcataactgtgcaagagagtaggggcatg
tctgatgaaataactgtggaaattaaaggtacctcaacacaggttcagttggctcaacaa
ctgattcaggaatttatgagcaatcacaaagatccggtaacaagcggcaactatagagac
tcaagttataggtcctcgtactctcagatggggagcacatcttcactatcaacgcaaccc
tatggcggatatgggggatcttcttcaaatgtaggtggctaccctacttttaggctttaa
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