KEGG   Gossypium raimondii: 105769990
Entry
105769990         CDS       T04129                                 
Name
(RefSeq) F-box protein SKP2A
  KO
K03875  F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
gra  Gossypium raimondii
Pathway
gra04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:gra00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    105769990
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:gra04121]
    105769990
Ubiquitin system [BR:gra04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     105769990
SSDB
Motif
Pfam: LRR_6 LRR_4 LRR_At5g56370 LRR_Zer-1 LRR_At1g61320_AtMIF1 F-box-like
Other DBs
NCBI-GeneID: 105769990
NCBI-ProteinID: XP_012446458
UniProt: A0A0D2TV68
LinkDB
Position
5:20633445..20637769
AA seq 372 aa
MISKAKVRSEELNSCFEKLLMVAAGNSGVGVRMEGAVITEWKDIPMELLLRIVPLVDDRT
AIVACGVCCGWRDAICFGLTQLSLSWCRKNMNNLVLSLAPKFTRLQTLILRQEYPQLEDN
AVEAIANFCHDIQELDLSKSFKLSDHSLYALARGCPNITKLNISGCTSFSDGALEYLTNF
CQKLKILNLCGCVKAATDRALQAIGRNCKMLQSLNLGWCDNVGDIGVMSLAYGCPDLKCL
DLCGCVRITDDSVIALADKCLHLRSLDLYYCRNITDRAMYSLAHSRVNNKPSLWQSMKGR
YDEEGLRSLNISQCTALTPSAVQTLCDTFPALHTCSGRHTLVMSGCLSLTSVHCACAVQA
HRTLNTIPHTAH
NT seq 1119 nt   +upstreamnt  +downstreamnt
atgataagcaaagcaaaggtgagaagtgaagagttgaactcgtgctttgagaagctgctg
atggttgctgctggaaatagtggcgtgggagttaggatggagggagcggtgatcactgag
tggaaagatattcctatggagctgctgttgagaattgtgcctcttgtcgatgatcggact
gctattgttgcttgcggtgtttgttgtgggtggagggatgctatttgcttcggtctcaca
caactcagtctctcatggtgcagaaagaacatgaacaacttggttctctctcttgctcct
aaattcaccagattgcaaactctaatactgcgtcaagagtatccgcaactcgaggacaat
gctgttgaggctattgcaaacttttgtcatgatatacaggagctggacctaagcaaaagt
ttcaagcttagtgatcactctttgtatgcattggcccgtggttgtcctaacattacaaag
cttaatatcagtggctgcacatctttcagtgatggagctcttgaatatttgactaacttt
tgtcaaaaactaaaaatattaaatctctgtggatgcgttaaagctgcaactgaccgtgca
ttgcaggctattggacgaaactgcaaaatgttgcaatctttaaatctgggatggtgtgat
aatgttggtgatataggagtgatgagtctagcttatggatgccctgatctcaaatgcctg
gacttgtgcggctgtgttcgcataacagatgatagtgtgattgcgttggcagataagtgc
ctccatttaaggtcacttgatctgtactattgtcgcaatatcacagacagggcgatgtac
tcgctggctcacagccgagtgaataacaagccttcgttatggcagtccatgaagggtaga
tatgatgaggaaggtcttagaagtctgaatataagccagtgtactgcactgactccttca
gccgtacagacattatgcgatacgtttccagcccttcacacttgctccggaaggcatacc
cttgtcatgagtggctgcttgagcttaacatcagtgcattgtgcttgtgcggtccaagct
catcggacactcaacactattccccatactgctcattga

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