Gossypium raimondii: 105769990
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Entry
105769990 CDS
T04129
Name
(RefSeq) F-box protein SKP2A
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
gra
Gossypium raimondii
Pathway
gra04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105769990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gra04121
]
105769990
Ubiquitin system [BR:
gra04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
105769990
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GFIT
Motif
Pfam:
LRR_6
LRR_4
LRR_At5g56370
LRR_Zer-1
LRR_At1g61320_AtMIF1
F-box-like
Motif
Other DBs
NCBI-GeneID:
105769990
NCBI-ProteinID:
XP_012446458
UniProt:
A0A0D2TV68
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Position
5:20633445..20637769
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AA seq
372 aa
AA seq
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MISKAKVRSEELNSCFEKLLMVAAGNSGVGVRMEGAVITEWKDIPMELLLRIVPLVDDRT
AIVACGVCCGWRDAICFGLTQLSLSWCRKNMNNLVLSLAPKFTRLQTLILRQEYPQLEDN
AVEAIANFCHDIQELDLSKSFKLSDHSLYALARGCPNITKLNISGCTSFSDGALEYLTNF
CQKLKILNLCGCVKAATDRALQAIGRNCKMLQSLNLGWCDNVGDIGVMSLAYGCPDLKCL
DLCGCVRITDDSVIALADKCLHLRSLDLYYCRNITDRAMYSLAHSRVNNKPSLWQSMKGR
YDEEGLRSLNISQCTALTPSAVQTLCDTFPALHTCSGRHTLVMSGCLSLTSVHCACAVQA
HRTLNTIPHTAH
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgataagcaaagcaaaggtgagaagtgaagagttgaactcgtgctttgagaagctgctg
atggttgctgctggaaatagtggcgtgggagttaggatggagggagcggtgatcactgag
tggaaagatattcctatggagctgctgttgagaattgtgcctcttgtcgatgatcggact
gctattgttgcttgcggtgtttgttgtgggtggagggatgctatttgcttcggtctcaca
caactcagtctctcatggtgcagaaagaacatgaacaacttggttctctctcttgctcct
aaattcaccagattgcaaactctaatactgcgtcaagagtatccgcaactcgaggacaat
gctgttgaggctattgcaaacttttgtcatgatatacaggagctggacctaagcaaaagt
ttcaagcttagtgatcactctttgtatgcattggcccgtggttgtcctaacattacaaag
cttaatatcagtggctgcacatctttcagtgatggagctcttgaatatttgactaacttt
tgtcaaaaactaaaaatattaaatctctgtggatgcgttaaagctgcaactgaccgtgca
ttgcaggctattggacgaaactgcaaaatgttgcaatctttaaatctgggatggtgtgat
aatgttggtgatataggagtgatgagtctagcttatggatgccctgatctcaaatgcctg
gacttgtgcggctgtgttcgcataacagatgatagtgtgattgcgttggcagataagtgc
ctccatttaaggtcacttgatctgtactattgtcgcaatatcacagacagggcgatgtac
tcgctggctcacagccgagtgaataacaagccttcgttatggcagtccatgaagggtaga
tatgatgaggaaggtcttagaagtctgaatataagccagtgtactgcactgactccttca
gccgtacagacattatgcgatacgtttccagcccttcacacttgctccggaaggcatacc
cttgtcatgagtggctgcttgagcttaacatcagtgcattgtgcttgtgcggtccaagct
catcggacactcaacactattccccatactgctcattga
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