Gossypium raimondii: 105770122
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Entry
105770122 CDS
T04129
Name
(RefSeq) transcription initiation factor TFIID subunit 4b isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
gra
Gossypium raimondii
Pathway
gra03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105770122
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gra03021
]
105770122
03036 Chromosome and associated proteins [BR:
gra03036
]
105770122
Transcription machinery [BR:
gra03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
105770122
Coactivators
SAGA/TFTC/STAGA complex
105770122
Chromosome and associated proteins [BR:
gra03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
105770122
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
RST
SPMIP10-like
Motif
Other DBs
NCBI-GeneID:
105770122
NCBI-ProteinID:
XP_012446631
UniProt:
A0A0D2QP75
LinkDB
All DBs
Position
5:complement(23423378..23428880)
Genome browser
AA seq
940 aa
AA seq
DB search
MDPSIVKLLEEDEDESMHSGADVEAFQAALNRDIEGDASNSQQSGSNTAVLSQGSNPASS
QSVAQWPTSGQDGNSNFQNQQVLQSAQQQQQTSSESEQKQHGAVVTGSQQQVQQPNDVPK
EHGRLPPQQKQPQEDHPQGVTEQIPAPVPQTTGIQSQTTEKSPISHEPERTNNQDSESQF
AKLQKMSNQQASGAEQPNSPMNRTKQVPFAVLLPALLPQLDKDRAMQLHTLYGKLKKNEI
AKDGFVRHMRDIVGDQMLRLAVNKLQVQMSSNQFPLQSPAGLRQNTPRMPSVGGATQFAG
PHSLVQLHQKGPNSPANSSHVPSTAVPMQTNSSYLSGENKAQKSQDMDRQSDSRFGMLGS
QISSSGSTTVNQERGRPSIPAQGINKQQQQHLNFPQTSFAMYGSNNYHTYSGPNVNTSGS
SLKPQPHDSQMRPTAHQSIGSNPVGGSTQAMNMMSGPKLERQNSSNDPNRLQGTSLSHFS
SGSVPWQASPSKELNPGPLSSATYVKQESADQGADQHRPHLSVTQGVSTTLAEQGKAVTS
TPKDEPGEKQSSRVGFTTTPSITAQMDSNVLLGSRNPSVPAPTGMNARTPQKKPSIGQKK
PLEALGSSPPPSSKKQKVSGAFSDQSIEQLNDVTAVSGVNLREEEEQLLSGPKDESRVSE
ASRRVVQEEEERLFLKKTPLQKKLAEIMAKSGLKNISNDVERCLSLSVEERMRGLICNLI
RLSKQRVDIEKPRHRTVITSDVRQQIMMMNQNARGEWEKKQAEAEKLRKLNEPEAETAFD
GDKEKDDSRVKAVKVNKEEDDKMRTTAANVAARAAVGGDDMLSKWQLMAEQARQKREGGT
DAASGSQASKDANRRPLSASGKSTKDNQESEKRGPLNPHGSGTSKKFGRNQGTTLTAHAR
VARTISIKDVIAVLEREPQMSKSTLIYGLYEKTCSESKAE
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atggacccttccatagtgaagctccttgaagaagacgaggacgagtctatgcattctgga
gctgacgttgaggctttccaggccgcgttgaatcgagacattgaaggcgatgcgtcaaat
tctcagcagtctggttcaaataccgcagttttgtctcaaggaagcaatccagcttccagt
caatcggttgcgcaatggccgacctcggggcaagacggaaactccaactttcaaaatcaa
caagtccttcaaagtgcacagcaacagcagcagacttcgtctgaatcggagcaaaagcaa
cacggagctgttgtcactggaagtcagcaacaagtgcagcagccaaatgatgttccaaaa
gaacatggtcgtctaccaccacaacaaaaacaaccccaagaggaccatccacaaggagtg
accgaacaaattcctgccccagttcctcaaactactgggattcagagtcagactactgaa
aaaagtcccatctcacatgaacctgagagaaccaataatcaagacagtgaatcacaattt
gcgaaattacagaagatgagtaatcagcaggccagcggagcagagcagccaaatagtcct
atgaatcgaacaaaacaagttccatttgccgtgttgttgcctgctttactgccccaactt
gataaagatagagccatgcagcttcatactctgtatggtaaactaaagaaaaatgaaatt
gcaaaagacggatttgttaggcacatgagagatattgtaggagatcagatgctgaggttg
gcagttaacaagttacaagttcagatgagttccaatcaattcccattacagtccccagca
ggattacggcagaatactcctcggatgccctctgttggtggtgccacacagttcgctggc
ccacattcattagttcagctgcaccaaaagggtcctaattctcctgccaattcatctcat
gtcccttctacagcagtccccatgcagactaattcaagttatttatctggtgaaaacaag
gctcaaaaatctcaagacatggatcgccaatcagattctcgctttggaatgctaggtagt
caaatttcttcctctggctcaaccactgtgaatcaagaaagaggtcgtccttcaattccg
gcacaaggaattaacaagcaacagcaacaacatttgaatttcccacaaacttcattcgcc
atgtatgggagtaataattatcatacatattctgggccaaatgttaatacttcgggttcc
tctctaaagcctcaacctcatgattcacaaatgaggccaactgcacatcaaagcattgga
tcaaatcctgtaggaggatcaacccaggcaatgaacatgatgagtgggcctaagcttgag
aggcaaaactctagtaatgacccaaatagattgcagggcacatcactttctcacttttct
agtggttcagttccttggcaagcctctccgagtaaggagctgaatcctggccctttgtca
tcagcgacatatgtgaaacaggaatctgctgatcaaggtgctgaccagcacagacctcat
ttgtctgtaacccagggagtctcgactacactagctgaacaagggaaagcagttacatct
actccaaaggatgagcctggagagaagcagtcttctagagttggcttcacaacaacaccc
tccatcacagcacaaatggattctaatgtcctgttgggctctaggaatccatctgtgcct
gctccaactgggatgaatgcaagaactcctcaaaaaaagccttctattggccagaagaaa
ccactggaagctcttggttcatcaccaccaccatcaagtaagaagcaaaaagtgtctgga
gcattttcagatcagagcattgaacaactaaatgatgtcactgctgtcagtggagtcaat
ctcagggaagaagaggagcaactattgtctggtcccaaggatgagagccgagtttcagaa
gcatccagaagggttgtgcaagaggaagaagaaagactatttttgaagaaaacccctttg
cagaagaaattggctgaaattatggccaaaagtggtttgaagaatataagcaatgatgtt
gaacgatgcttgtccctgagcgtggaggaaagaatgcgtgggctcatatgcaatttaatc
agactgtcgaaacagcgtgttgatattgagaagcctaggcaccggacggttatcacctcg
gatgttcggcagcaaattatgatgatgaaccagaatgctaggggagaatgggagaaaaag
caggctgaggcagagaagctccggaaacttaatgaacccgaggctgagactgcctttgat
ggtgacaaggagaaagatgacagtcgagtaaaagcagtaaaggtaaataaggaggaggat
gacaagatgaggaccactgctgcaaatgttgctgctcgtgctgctgttggaggggatgac
atgctgtcaaaatggcagcttatggctgagcaagctcgccagaaacgtgagggaggaacg
gatgcggcatctggttcacaagcaagtaaagatgcaaaccgcagacctttatctgcatct
gggaaaagtacaaaggacaatcaagaatctgaaaagaggggccctctcaatcctcatgga
tctgggacaagcaagaaatttggtcggaaccaaggtacgacactcacggcccatgctaga
gtggctcgtactatttccattaaggatgtgattgcagttctggaaagagagccccaaatg
tcaaagtctacacttatttatggcttgtacgaaaaaacctgctccgaatctaaagcggag
tga
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