Gossypium raimondii: 105770124
Help
Entry
105770124 CDS
T04129
Name
(RefSeq) SWI/SNF complex subunit SWI3B
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
gra
Gossypium raimondii
Pathway
gra03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105770124
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gra03021
]
105770124
03036 Chromosome and associated proteins [BR:
gra03036
]
105770124
Transcription machinery [BR:
gra03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
105770124
Chromosome and associated proteins [BR:
gra03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
105770124
PBAF complex
105770124
GBAF(ncBAF) complex
105770124
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
Myb_DNA-binding
SWIRM-assoc_1
Myb_DNA-bind_6
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
105770124
NCBI-ProteinID:
XP_012446635
UniProt:
A0A0D2TS58
LinkDB
All DBs
Position
5:14394817..14397711
Genome browser
AA seq
464 aa
AA seq
DB search
MAEKSPVKEAASSESIPISNSNQLKPSPQLPSKFSSQTAPNSEVPSTPTSRPPSADADVV
YVPSYSRWFSWDKIDSCESRFLPEFFDGRSASKGPSLYIYYRNSIIKLFRENPSRKITFT
DVRKTLVGDVGSIRRVFDFLDHWGLINYSASSALSKPSKDTGSNIKSSDSPSVESPSSAA
PTSKHSSNSRRICGACKSLCTIACFVCDKYDSTLCARCYVRGNFRVGLSNADFRRVEITD
EAKADWSEKETLLLLEAIMHYGDDWKKVAQHVGGRTDKDCVAHFVKLPFGEEYLGHPLSN
DDESGFETNKRMCLTPLADASNPIMAQAAFLSALAGVEIAEAAAQAAVSVLSQVDDITAS
RVGSGSLERNSKQETEISSNGDTNQNALERAAYADANSLLDKEEQDIERAITGITEVQMK
EIQDKFLRFEEMDLQTEKERQQLESMKNLLFIDQLNLSFRRNYT
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaaatcaccggtgaaagaagctgcttcctcagagagcatccccatctcgaac
tcaaaccagttgaagccatctccccaattaccctccaaattctcttcccaaacggcaccc
aactctgaagtgccctccacgcccacaagccgtcctccttccgccgatgccgacgtcgtt
tacgtccccagctactcccggtggttctcgtgggataagatagactcttgcgagtcccgt
ttccttccggagtttttcgacggtcgctcggcttccaaaggccccagtctttacatttat
tacagaaactcaattataaagctattcagggaaaacccttcccgtaagattaccttcact
gacgtcaggaagactcttgttggcgatgttggatccattcggagggttttcgatttcctt
gaccactggggtctcatcaattactctgcctcctctgccctttccaagccctccaaagat
actggttctaatattaaatcctcagattccccttctgttgaatccccttcttctgctgcc
ccgacctccaaacactcctctaattccaggcgaatctgcggggcgtgcaagtctctttgt
accattgcttgcttcgtttgcgacaagtatgactccaccctgtgtgcaaggtgctatgtt
cggggcaacttcagggttggtctaagcaatgctgatttcaggcgggtagagatcactgat
gaagccaaggcagattggtcagaaaaagagacattgctgcttctggaagccattatgcat
tatggtgatgactggaagaaggttgcacagcatgttggtggtagaaccgacaaggattgt
gtggctcatttcgttaagcttccttttggggaggaatatcttggacatccattatctaac
gacgatgaatctggatttgaaactaataaaaggatgtgcctcacgcctctggctgatgca
agcaacccaatcatggctcaggctgcctttttgtcagctttggctggtgtagagattgca
gaagcagctgcccaagcagctgtttccgttctatctcaggtcgacgacatcacagctagc
agagtggggagtgggtctcttgaaagaaactcgaaacaagaaactgaaatttcatctaat
ggtgacaccaaccaaaatgcattggaaagagcagcatatgcagatgcaaattcactactt
gacaaggaagaacaagatattgaaagggcaattactgggattacagaagtgcagatgaaa
gagatacaagacaagtttcttcgttttgaggagatggatttgcagactgagaaagagagg
caacaactggagagcatgaagaatctactttttattgaccagctcaatctttcatttcgt
agaaactatacatga
DBGET
integrated database retrieval system
