Gossypium raimondii: 105770130
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Entry
105770130 CDS
T04129
Name
(RefSeq) uncharacterized protein LOC105770130 isoform X1
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
gra
Gossypium raimondii
Pathway
gra03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
105770130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gra03009
]
105770130
Ribosome biogenesis [BR:
gra03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
105770130
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Utp12
ANAPC4_WD40
Beta-prop_IFT122_1st
WD40_WDHD1_1st
Beta-prop_THOC3
Beta-prop_EML_2
WD40_Prp19
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_WDR3_1st
WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR3_2nd
Beta-prop_Vps41
WDR55
Beta-prop_Nup120_160
Beta-prop_ACSF4
Beta-prop_WDR19_1st
Beta-prop_WDR36-Utp21_2nd
EIF3I
WD40_MABP1-WDR62_1st
Hira
DUF6242_C
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
105770130
NCBI-ProteinID:
XP_052487670
LinkDB
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Position
5:9876455..9881679
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AA seq
622 aa
AA seq
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MGKQKVKPLLTCFTQEGDYLAILSPDGTVKIWSTSTGSLLAEWKQSDGNLPNSYSCMACS
FIPKKGRGTCLLAIGLNEGDIWIIDVLAGDKKWSSTGYYPSGIAGLSFRNKGHSLYVIGS
NGKASEINSENGDLIREFKASKRSITSLTFSQDGKYLALANGKLRVSSLENGKELLKSPD
DLDPVQYISISNDAKTIVTSGFGETNLQVWSCDLSSKTLSGGSVISMPRPPLAFECKNSG
SDEDGSVILALSESGIAYVWNLDTVSQDDVEPTKITVKLDKAEGDQQKSAGSRKSRIPVI
SARLHATGMDQQVVALIAYGPLDSPQFSLVNVSKAGENIVINVVDQTETIQENGTSLLKV
DPNGKPNKKRAAPDPDLATTRSTNDTGHGENVDGVLVNDDPSEPTMAEKLASLNLIENGK
NETNENQERKEPSTHGKPPIADSVIVLLKQALRADDHALLLDCLYTQDEKVIANSVSQLN
PSDVLKLLQSLVSITQSRGAVLACALPWIKSLLLHHASGIMSQESSLLALNSLYQLIESR
VSTFESALQISSCLDFLYAGVVEDEFVEDAAIPVIFEDTDESDEEEPEDAMETDDQENED
GEALDEASDGVSDFEGIDDMSD
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagcagaaagtgaaacccctccttacatgtttcactcaagaaggtgattatctc
gccattttgtctccggatggaactgttaaaatttggagcacaagtactgggagtttattg
gcggagtggaagcagtcagatggcaaccttcctaatagttattcctgtatggcttgcagt
tttatcccaaagaaggggcgtggaacttgcttacttgctattggattaaatgaaggggac
atctggattattgatgtcttagctggtgacaagaagtggtcatctactggttattatcct
agtggaattgcaggtctttcattcagaaataaaggtcatagtctgtatgtcattggaagc
aatggaaaggcatctgaaataaactcagaaaatggagatttgataagggagttcaaagct
tccaaaaggtccatcacttctttgacattttcacaagatgggaagtatttggctttggcc
aatggtaagcttcgtgtctccagcctggaaaacgggaaagagcttctaaagtctcctgat
gatttggatcctgtgcaatatataagtatatccaatgatgccaagacaattgttacatca
gggtttggggagacaaatcttcaagtctggagttgtgatttgagttccaaaactctgagt
ggtggctctgttatttcaatgcctcgccctccgttagcttttgaatgtaagaatagtggt
agtgacgaagatggttctgtgatcttggcactttcggagtctggtattgcttatgtttgg
aatttggacaccgtttcccaggatgatgttgaaccaacgaagattactgtcaaacttgat
aaagcagagggagaccagcagaagagtgcaggctcaaggaaaagtcgtattcctgttatc
tctgctagattacatgctacaggcatggaccaacaggttgttgcccttattgcttatggt
ccattagattctccacagtttagtcttgtgaatgttagcaaagcaggggagaatattgtt
ataaatgttgtggatcagactgaaactattcaagaaaatgggacatctttgttaaaagtt
gatccaaatggaaaaccaaataaaaaaagagctgctcctgatccagaccttgctacgaca
agaagcacgaatgatactggtcatggagagaatgttgatggagttctcgtcaatgatgat
ccgagtgagcctaccatggctgagaaacttgcaagtttaaatttaatagaaaatggaaaa
aatgaaaccaatgaaaaccaagaaagaaaagaaccctctactcatggcaagcctcccatc
gcggattcagttattgttctgcttaagcaggcactccgtgctgacgatcatgcacttctg
ttagattgcttatacactcaagatgagaaggttattgcaaattcagtctcccaattaaat
ccatctgatgttctcaagcttttacaatctcttgtatctataactcaatcaaggggtgca
gtattggcatgtgcgcttccttggataaaaagtttacttcttcatcacgctagtggaatt
atgtcccaggaatcctctcttcttgctctgaactctttgtatcagcttattgaatctaga
gtctcaacttttgaatcagctcttcaaatatcaagttgcttagacttcctttatgcaggg
gttgttgaggatgagtttgttgaggatgctgcaattccagtaatatttgaggacacggat
gaaagtgatgaagaggaaccggaagatgcaatggaaactgatgatcaagagaacgaagat
ggggaagcacttgatgaagcatctgatggggttagtgattttgaagggattgatgatatg
agtgactga
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