Gossypium raimondii: 105770304
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Entry
105770304 CDS
T04129
Name
(RefSeq) N-glycosylase/DNA lyase OGG1
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
gra
Gossypium raimondii
Pathway
gra03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
105770304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gra03400
]
105770304
Enzymes [BR:
gra01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
105770304
DNA repair and recombination proteins [BR:
gra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
105770304
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
RecR_HhH
HHH
HHH_2
HHH_8
Motif
Other DBs
NCBI-GeneID:
105770304
NCBI-ProteinID:
XP_012446891
UniProt:
A0A7J8Q2P6
LinkDB
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Position
5:complement(20141298..20143978)
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AA seq
383 aa
AA seq
DB search
MHSLKPPLAMKRPRPPSPPPLSPASTKQTSPPPRPLKSLHPNTPPISSKKPKSHPKWVPL
NLSQTELSLPLTFPTGQTFRWKQTGPLQYTGTIGPHLLSLKHLQNGDVSYFIHFTPSESA
AKLALLDFLNVSISLANLWEVFSENDSRFAELAKYLKGARVLRQDPVECLVQFLCSSNNN
IGRITKMVDFISSLGTHLGSVGGFDFHEFPSLERLSAVSEEELRQAGFGYRAKYITGTVD
VLQSKPDGGAQWLLSLRKLDLQEAIDALCSLPGVGPKVAACIALFSLDQHHAIPVDTHVW
QIATKYLLPELAGARLTPKLCSRVAEAFVSKYGEYAGWAQTLLFIADLPSQKALLPSHFW
DIKEKKSAKIEDSNSCNIDGNYS
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgcactcactgaaacctcccctagcaatgaaaagaccaagaccgccttcgccaccaccg
ctctcccccgcctccaccaaacagacatctcctccgccgcggccacttaaatccctccac
cccaataccccaccaatctcctccaagaagcctaaatcccaccccaaatgggtgccactc
aacctctcccagaccgaactctcccttcccctcactttccccaccggccaaaccttccgc
tggaaacaaacaggccctcttcagtacaccggcaccatcggaccccatttgctatccctc
aagcacctccaaaacggcgacgtttcttacttcatccacttcaccccttccgaatcggct
gccaagctggccctcctcgatttcctcaacgtgagcatttccttggccaatctctgggag
gttttctccgagaatgactccaggtttgccgagctagccaagtatttgaagggtgctcgg
gttttgaggcaggacccggttgagtgcttggttcagttcctttgttcttctaataataat
atcgggaggattactaaaatggtggatttcatttcctctttgggtactcatttgggcagt
gttggtgggtttgactttcatgagttcccttcattggaacgtttatctgctgtctctgag
gaagagcttagacaggctggttttggttacagggctaagtacattactggcacagttgat
gttttgcaatcaaaaccggatggaggtgctcaatggcttctctctcttcgtaaattggat
cttcaagaggccattgatgctctatgttctttgcctggagttggtcccaaggtagcggca
tgtattgctctcttctctctcgatcagcaccatgccattccggttgacacgcatgtgtgg
cagattgctacaaagtacctccttcctgagctagccggtgcccgtttgacacctaagctt
tgcagccgtgtggcagaggcatttgtaagcaaatatggggagtatgctgggtgggctcag
acgctcctttttatcgctgatttaccttcacaaaaggccctcttaccatcccacttttgg
gatattaaagagaaaaaatctgccaaaattgaagacagtaacagttgcaatatcgatgga
aactacagttga
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