KEGG   Gossypium raimondii: 105771314
Entry
105771314         CDS       T04129                                 
Name
(RefSeq) cullin-3B
  KO
K03869  cullin 3
Organism
gra  Gossypium raimondii
Pathway
gra04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:gra00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    105771314
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:gra04121]
    105771314
   03400 DNA repair and recombination proteins [BR:gra03400]
    105771314
Ubiquitin system [BR:gra04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul3 complex
    Cullin
     105771314
DNA repair and recombination proteins [BR:gra03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     105771314
SSDB
Motif
Pfam: Cullin Cullin_AB Cullin_Nedd8 DNA_repr_REX1B Viral_NABP
Other DBs
NCBI-GeneID: 105771314
NCBI-ProteinID: XP_012448190
UniProt: A0A0D2TVI2
LinkDB
Position
5:32409629..32414753
AA seq 732 aa
MSNQKKRIFQIEAFKNRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMV
LHKFGEKLYSGLVTTMTAHLKEISKSIEAAQGDLFLEELNRKWNDHNKALQMIRDILMYM
DRTYIPNTHKTPVHELGLSLWRDNIIHSGKIQSRLLSTLLELVHRERTGEVIDRGLMRNI
VKMLMDLGSSVYQEDFEKPFLEVSAEFYRRESQKFIECYDCGDYLKKAEIRLNEEIERVT
HYLDAKSEGKITNVVEKEMIANHMMRLVHMENSGLVNMLLNDKHGDLGRMYNLFRRVPNG
LAMIRDVMTSHLRETGKQLVTDAERLKDPVEYVQRLLDEKEKYDGIISLAFSNDKTFQNA
LNSSFEYFINLNSRSPEFISLFVDDKLRKGLKGVSEEDVEIILDKVMMIFCYLQEKDVFE
KYYKQHLAKRLLSGKTVSDDAERSLIVKLKTACGYQYTSKLEGMLTDMKTSQDTMQGFCS
SHPELTDGPTLVVQVLTTGSWPTQPSITCHLPFEMSALCEKFRSYYLGIHTGRRLSWQTN
MGTADIKAIFGKGQKHELNVSTYQMCILMLFNNADRLSYKEIEQVTAIPASDLKRCLQSM
ACVKGKNVLRKEPMSKDIGEDDSFFVNEKFASKFYKVKVGTVVAQKESEPEKQETRQRVE
EDRKPQIEAAVVRIMKSRKVLDHNNIIAEVTKQLQSRFLANPTEIKKRIESLIEREFLER
DNSDRKMYRYLA
NT seq 2199 nt   +upstreamnt  +downstreamnt
atgagtaatcaaaagaaaaggatcttccaaatagaagcattcaagaaccgggtcgtggtg
gatccgaaatatgcagaaaagacctggaaaattctcgaacatgcaatccatgagatttac
aaccataacgctagtggcctcagttttgaagagctttacaggaatgcatacaatatggtt
ttgcacaaatttggtgagaagctgtactcaggactcgttacaactatgactgcacacctc
aaagaaatatcaaaatctatagaggctgctcaaggtgatttatttctcgaagagctgaac
aggaaatggaatgaccataacaaggccttgcaaatgattcgagacatattgatgtacatg
gacaggacttatattccaaatacccataaaacccctgtccatgagctgggacttagcttg
tggagggataacattatacattctggcaaaattcagtcgaggcttctgagcacacttctt
gaactggtgcatagagagcgaactggggaagttatagaccgggggctgatgaggaacata
gtcaagatgcttatggatttgggttcttctgtttaccaggaggattttgagaagccattt
cttgaggtttctgctgagttttacaggcgtgaatctcagaaatttattgagtgctatgat
tgtggggactatctaaagaaagcagagatacgtctaaatgaagaaattgagagagttacc
cactacttggatgccaagagtgaaggcaagataactaatgtggtggagaaggaaatgatt
gctaaccacatgatgagattagtccacatggagaactccggcttggtaaatatgcttctt
aatgacaagcatggtgacttgggtagaatgtacaatttatttagaagagttcctaatggt
cttgcaatgatacgagatgtgatgacatcacaccttagagaaacgggtaaacaactagtt
actgatgcagaaaggttgaaagatcctgtggagtatgtccaacggctcttggatgaaaag
gaaaaatatgatggtatcattagcctagcatttagcaatgacaagacattccagaacgct
ctcaactcctcatttgaatatttcattaatttgaattctcgttcccctgagttcatttca
ttatttgtggatgataagcttcgtaaaggtttgaaaggagtcagtgaggaggatgtggag
ataattcttgacaaagttatgatgatcttctgctatctgcaggagaaggatgtgtttgag
aaatactataagcagcacctagctaagcggcttttgtcaggcaaaactgtatctgatgat
gcagaaagaagtctgatagtcaagcttaagacagcatgtggatatcaatatacttcaaag
ttagaaggcatgcttacagacatgaagacctcccaagacacaatgcaagggttttgctct
agccaccctgagctcacagatggccctaccctagttgttcaggttctaacaacggggtct
tggcccactcagcctagtattacttgccacctaccctttgagatgtcagcattgtgtgag
aagtttcggtcatattatcttggaatccatactggtcgaagattatcctggcaaactaac
atggggacagcagatataaaagcaatttttgggaagggtcagaagcatgagttaaatgtt
tcaacttaccaaatgtgtatattgatgctttttaataatgctgataggcttagctacaag
gaaattgaacaagtcacagcgattcctgcttcagacttgaaaagatgcttgcaatcaatg
gcatgtgtgaagggaaagaatgttcttaggaaagaacctatgagtaaagatattggcgag
gatgattcattttttgttaatgaaaagtttgcaagcaaattttacaaggtgaaggtagga
actgtggttgcacaaaaggagtcagaacctgaaaagcaggagacccgacaaagagtggag
gaggacaggaagccgcagattgaagctgcagtagttaggatcatgaagtcaaggaaggtg
ctagatcacaacaatataatagctgaggttacaaaacagttgcagtcacggttccttgcg
aacccaacggagataaagaaacggatagagtctctaatcgagcgggaattcttggaaagg
gacaatagtgataggaaaatgtataggtatctagcctaa

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