Gossypium raimondii: 105771412
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Entry
105771412 CDS
T04129
Name
(RefSeq) pleiotropic drug resistance protein 2
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
gra
Gossypium raimondii
Pathway
gra02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
105771412
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gra02000
]
105771412
Transporters [BR:
gra02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
105771412
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
ABC_trans_N
AAA_29
AAA_16
ABC2_membrane_3
SMC_N
AAA
Rad17
AAA_23
AAA_33
AAA_18
AAA_22
RsgA_GTPase
AAA_30
AAA_25
AAA_28
Zeta_toxin
TsaE
NACHT
nSTAND3
AAA_5
cobW
PduV-EutP
RuvB_N
NTPase_1
ABC_ATPase
T2SSE
AAA_19
AAA_11
AAA_17
Viral_helicase1
ORC-CDC6-like
Motif
Other DBs
NCBI-GeneID:
105771412
NCBI-ProteinID:
XP_012448325
LinkDB
All DBs
Position
5:complement(27821300..27829362)
Genome browser
AA seq
1489 aa
AA seq
DB search
MALALTGDDLVRSMSRRMSTTGLGSRGGLASASIREAMNNRSMSTGLGSRRGWASTSIRE
AWNNQTDVFQRSGREEDEEELKWAAIERLPTYDRIRKAMLKQVLEEGKVGYEQVDIANLD
MHDKKNLMESILSVVEQDNERFLLRLRERTDRVGIDVPKIEVRFEHLSIEGDAYLGTRAL
PTLLNSTLNTLEGALGLMKLFPSKKRVVNILGDVSGIVKPSRMTLLLGPPGSGKTTLLQA
LAGKTDTNLRVSGKITYCGHEFQEFIPQRTSAYISQHDLHHGEMTVRETLDFSGRCLGVG
TRYELLAELSRREKQAGIKPDPEIDAFMKATAMAGQNTSLVSDYVLKILGLDICSDIMVG
DDMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMKQMVHIMDVTM
VISLLQPAPETYDLFDDIILLSEGKIVYQGPREHVLEFFESLGFKCPERKGIADFLQEVT
SKKDQQQYWCRENEPYHYVSVSKFVEHFNSFHVGQKLDDELRIPYDKSRIHPAALVKEKY
GISNWELFKACFAREWLLMKRNSFVYIFKTTQITIMSVIAFTVFFRTKMKAGHISNGTKF
YGALFFSLINVMFNGMAELALTIFRLPVFFKQRDFLFYPAWAFALPIWVLRIPLSLLESG
IWILLTYYTIGFAPSASRFFRQFLAFFGIHQMALSLFRFIAAVGRTQVVANTLGTFTLLV
VFVLGGFVVAKDDIKSWMIWGYYISPMSYGQNAIVITEFLDKRWSTPFNSTTVGKVLLKS
RGMYTEEFWYWICVAALLGFSLLFNLCFIAALTYLNPLGDSKAVILEEEDESKKQSSSNG
QPNLKSIEMSSPSTDMAMKNNLDNSVPSGANQGPSKRGMVLPFQPLSLAFDHVNYFVDMP
AEMKSQGIEETRLQLLRDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSIS
ISGYPKNQQTFARVTGYCEQNDIHSPHVTVYESLVYSAWLRLAKDVDAETRKMFVEDVME
LVELNPLKNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMR
TVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQVIYAGPLGRQSHKLVEYFEAIP
GVPKIKEGYNPATWMLEISSTAVEAQLDVDFSEIYSKSELYRKNEELIKDLSTPVPGTKD
LHFPTTYSQGFFTQCKACFWKQHNSYWRNPQYNAIRFFMTFFVGIIFGLIFWGKGDKIHK
QQDLMNLLGAMYSAVLFLGATNTSAVQSVVAIERTVFYRERAAGMYSPLPYAFAQVAIEA
IYVSIQTLMYSILLYSMIGFHMDVGKFFLFYYFILMCFMYFTLYGMMLVALTPNHQFAAI
VMSFFLSFWNLFSGFLIPRTEIPIWWRWYYWASPVAWTINGLVTSQVGDKDDPVVIPGEL
PMAVKAYLETHLGFRYDFLPVVVAAHIGWVLLFLFVFAYGIKFLNFQRR
NT seq
4470 nt
NT seq
+upstream
nt +downstream
nt
atggcattggcattgaccggagacgacctcgtccggtcgatgagccggagaatgagtact
acgggattgggaagcagaggaggcttggcttcggctagtatacgtgaggcgatgaacaat
cggtcgatgagcacgggattgggaagcagaagaggctgggcttcaactagtatccgagag
gcatggaataatcaaaccgatgtcttccagcgaagtgggagggaagaagatgaagaggaa
ctgaaatgggccgccatcgaaaggcttccaacatacgatcgtattcgaaaagcaatgctg
aaacaggttttggaggaaggaaaagtgggatacgaacaagttgacatcgccaacctcgac
atgcacgacaagaagaacctcatggaaagcatactaagcgtcgtggaacaagataatgag
aggtttcttcttagacttcgagagagaaccgatagggtgggaattgatgttccaaagatt
gaagttcgatttgagcatttatccatagaaggagatgcgtatcttggaaccagggctctt
ccaacattgctcaactcaaccttgaacacacttgagggggcccttggattaatgaagctt
ttcccttcgaagaaaagagtggtcaatatacttggtgatgtgagtggaatagtgaaacca
tcaagaatgacattgcttttaggacctccagggtctggaaaaactacactgttgcaggca
ctcgctgggaaaaccgacactaatttaagggtatcaggaaaaataacgtattgtggccat
gaatttcaagaatttattcctcagaggacaagtgcttatataagtcaacatgatcttcac
catggtgagatgactgtaagggaaacactagatttctcagggcggtgcttgggagttggg
acccgatatgaactcttggctgagttatcaaggcgagaaaaacaggctgggattaaacca
gaccctgagattgatgctttcatgaaagctactgcaatggctggccaaaacactagtctc
gtttctgattatgtgctcaagattcttggactggatatctgttctgatattatggtgggt
gatgacatgagaaggggcatatctggtggacaaaagaagcgtgtcactacaggggagatg
ttggttggacctgcaaaagctcttttcatggatgagatttcaactggtttggatagttct
acaacttttcagattgtaaggtttatgaagcaaatggttcatatcatggatgtaaccatg
gtcatctctcttttgcaacctgcaccagaaacctatgacctttttgatgacattatcttg
ctttctgagggtaagatagtctatcaaggaccacgagaacatgttctcgagttctttgaa
agtttgggattcaaatgtcctgaaaggaaaggaatagcggatttcctacaagaagtgact
tcaaagaaagaccagcagcagtattggtgtagagaaaatgaaccttatcattacgtatcg
gtatcaaagttcgtggaacatttcaactctttccatgttggtcaaaaacttgatgatgaa
ctcaggattccttatgataaatccagaattcatccagctgcattggtgaaagaaaagtat
ggaatctcaaactgggaacttttcaaggcttgttttgcaagagaatggctactgatgaag
cgcaactctttcgtatatatattcaagacaacccagataaccattatgtctgtcattgct
ttcactgtgttttttaggaccaaaatgaaagctggtcatatatcaaatggaacaaaattt
tatggtgcactgttctttagtctcattaatgtcatgtttaatgggatggcagagcttgca
ctcaccatatttaggcttccagttttcttcaaacaaagggatttcttattctatccagca
tgggcctttgctttgccgatttgggtccttaggattcccctttctttgcttgagtcaggg
atatggatcctcctcacatattacaccattggttttgccccatctgctagcaggtttttt
cgacaattcttggcattctttggcattcaccagatggccctttctctctttcgattcatt
gctgcggttggaagaacacaggttgtagcaaacacacttggtacctttaccttgctggtg
gtttttgtacttggcggatttgttgttgccaaagatgacatcaagtcatggatgatatgg
ggatactacatctctccgatgtcgtatggacaaaatgctattgtcattactgaatttctt
gacaaaagatggagtactccatttaactccaccacagtagggaaagttcttctcaaatcc
agaggcatgtatacagaagagttttggtattggatttgtgttgcagcactcctcggattt
tctctgctttttaatctctgttttattgcagcattgacctatttgaatcctctgggagat
tccaaagctgttattctggaagaagaggatgagagcaagaagcaatcatcttccaatgga
cagcctaacttaaaatccatagaaatgagttcaccatcaactgatatggcaatgaagaat
aatcttgacaactcagttcctagtggtgcaaaccaaggaccttcaaagaggggaatggtg
ttacctttccaacccttgtcacttgcatttgaccatgtgaattacttcgttgacatgcct
gctgaaatgaagagccaaggaattgaagagactcgtcttcaattactacgagacgtaagt
ggagcttttaggcctggcgtgctaacagcattagttggggttagtggagcaggaaagacc
accttgatggatgttctagcaggaagaaaaaccggtggctatattgaaggaagtattagc
atttctggttacccaaagaaccaacaaacttttgctcgggttaccggttactgtgaacaa
aacgatatccattctcctcatgttaccgtctacgaatctctcgtctactcagcctggctt
cgtcttgcaaaggatgttgatgcagaaacacgaaagatgtttgttgaagacgtaatggag
ttggttgagctaaatcctctcaagaattctcttgtcggcctgcctggagtcgatggcctg
tcaacggaacaaaggaaaaggctcacaatagctgtagaattggttgctaatccatcaatc
atcttcatggatgaaccaacatcgggacttgatgctagagcagctgctattgtcatgcgt
accgtgagaaatacagtggatactggaagaactgtggtctgcacaattcaccaaccaagc
atagacatttttgaagcctttgatgagctctttctgatgaagagaggtggacaagtcatt
tatgctggacctcttggccgccagtcccacaaacttgtagagtactttgaagctatccca
ggggttcccaagatcaaagaagggtacaaccctgcaacttggatgctggaaattagttcc
actgctgtcgaggctcaacttgacgtcgattttagtgaaatttattccaaatctgaactt
tataggaagaatgaggaacttatcaaagatctaagcaccccagtccctgggactaaggac
cttcacttccctacaacatactctcaaggcttctttactcaatgcaaagcctgcttctgg
aagcaacacaactcatattggaggaacccacaatacaatgccattcgatttttcatgaca
tttttcgttggtatcatattcggactgattttctggggcaagggagataagatacacaag
caacaagatctaatgaatctcttgggagctatgtactcagctgtccttttcctaggagcc
accaacacttcagcggtacaatccgttgtggcaatcgaaagaacggtcttctatcgtgaa
agagcagcaggaatgtattcaccattgccttatgcatttgctcaggtagcaatagaggca
atatatgtttcaatccagacattgatgtatagcatattgctttactcaatgattggattc
cacatggatgttgggaagttcttcttgttctactacttcatattgatgtgcttcatgtac
ttcacactctatgggatgatgcttgtagctcttacacctaaccatcaatttgctgccatt
gtcatgtccttctttctaagcttttggaacctcttttctggtttcctcatccctaggacg
gaaataccaatttggtggagatggtactattgggcatctccagtggcatggacaatcaat
ggacttgtgacatcccaagtgggtgacaaagatgatcctgttgtgataccaggagagttg
ccaatggcagtgaaagcttaccttgagacacacttagggtttaggtatgatttccttcca
gttgttgttgctgcccatattggttgggtccttctcttcttatttgtctttgcatatgga
atcaagttcctcaacttccaaaggagatga
DBGET
integrated database retrieval system
