Gossypium raimondii: 105771624
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Entry
105771624 CDS
T04129
Name
(RefSeq) class V chitinase CHIT5a
KO
K01183
chitinase [EC:
3.2.1.14
]
Organism
gra
Gossypium raimondii
Pathway
gra00520
Amino sugar and nucleotide sugar metabolism
gra01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
105771624
Enzymes [BR:
gra01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.14 chitinase
105771624
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_18
Motif
Other DBs
NCBI-GeneID:
105771624
NCBI-ProteinID:
XP_012448506
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Position
13:complement(53787259..53789285)
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AA seq
409 aa
AA seq
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MASLKSTCVLFLAMFCISVTKSEPYFSPGPAPEIFPPLPVSYVPTPAPGPTSYPPVPAVS
PSPRGIKAAYWPSFESFPVSSIDTSFFTHIYYAFLLPEPNFFKLNVTSLDQQKLPEFMSG
LSAKNPPVKTILSIGGGGNDPNVFAGMASTKCTRAVFINSTIEVARNYQFDGIDLDWEFP
ETVDDMANLALLFEEWSEALQNEAETSWKPRLLLTAAVYYSSEFTTYGVPRSYPARAMAK
YLDWMNPMCFDYHGKWDNFTGMHSALFDPNTSASSSHGIGSWIRAGVPPGKLVMGLASYG
HTWKLQDPNINGIGAPATGVGPGDDPGLFDYYAILDFNKENNATVKYDRTTVSYYSYVGD
TWIGYDDVKSIKWKVWFARVKGLAGYFFWAVGYDKEWALSRQALMAWEY
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggctagcctcaagtctacatgtgttttgtttctggctatgttttgcatatctgtaaca
aaatccgaaccatatttttcaccagggccagcccctgaaattttcccaccactacccgta
tcttacgtgccaactccagctccaggccctacttcttacccacctgtgccagcagtttcg
ccatctccacgaggaatcaaagctgcttattggccatcgtttgaatcctttccagtttcc
tccattgacacttcatttttcacccatatttactacgcctttctcttacccgaacccaac
tttttcaaacttaacgtcacctcattggaccaacaaaagttacccgaattcatgtccggg
ttaagcgccaaaaacccacccgtcaagaccatactctccataggaggcggtgggaacgac
ccgaatgtgttcgctggaatggcgagtaccaaatgcacgcgcgcggttttcattaattca
accatcgaagtagctcggaattaccagttcgacggtattgacttggactgggagtttcct
gaaaccgtcgacgacatggccaacctcgctttgttgttcgaggaatggagcgaagcactt
caaaacgaagccgaaaccagctggaaaccacgtttgcttttgactgctgccgtatattac
tcatcggagttcactacttacggcgtgcctcgatcgtatccggctcgtgctatggccaaa
tatttagattggatgaatccaatgtgcttcgattatcatgggaaatgggataacttcact
ggaatgcattcagcacttttcgatcccaatactagtgctagcagtagccacggaatcggg
tcttggattcgggctggggtgccgccgggaaaactggttatggggctggcatcatatggg
catacatggaagctccaggatccgaatattaatgggataggagcaccggcaaccggcgta
gggccgggagatgacccggggttgtttgattattatgctatattggattttaacaaggag
aataatgctacggtgaagtacgataggacaacggtgtcgtattactcttacgttggggac
acgtggattgggtacgatgatgttaagtccattaagtggaaggtctggtttgcaagggtt
aaaggcttagctgggtatttcttttgggctgttggttatgataaagagtgggctctctcg
agacaagctctaatggcatgggagtactag
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