Gossypium raimondii: 105771702
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Entry
105771702 CDS
T04129
Name
(RefSeq) uncharacterized protein LOC105771702
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
gra
Gossypium raimondii
Pathway
gra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105771702
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gra03041
]
105771702
Spliceosome [BR:
gra03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
105771702
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
105771702
NCBI-ProteinID:
XP_012448561
UniProt:
A0A0D2VC52
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Position
6:complement(52095292..52098740)
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AA seq
549 aa
AA seq
DB search
MKSKRELGDSVDGERDLKRQRVLDSPSSPPEESLVPYNDDEDDERRALNHIGSREEDGHR
VKSEEEDDEDEDDPYGLGATPGRSNRQVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNL
NVYACLVCGKYYQGRGKKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLDDIRH
VLYPRFSREQLEQLDKNKQWSRALDGSDYLPGMVGLNNIQKTDFVNVTIQSLMRVTPLRN
FFLIPENYQHCRSQLVHRFGELTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQCE
PVEFMSWLLNTLHADLRTSKKSSSIIHKCFQGELEVVKETQSKAISEKKESDGEQNGALK
ITDGQIENNNVAAETYRMPFLMLGLDLPEPPLFKDVMEKNIIPQVPLFNILKKFDGEMVT
TTVRPPARMRYRVTKLPQYLILHMRRFTKNNFFREKNPTLVNFPVKNLELKDYIPLPAPT
KENEKLRTKYDLIANVVHDGKPDEGFYRVFVQRKSEELWYEMQDLHVSETLPQMVALSEA
YMQIYEQQQ
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcaaaaagggaacttggtgatagtgtagacggggaacgagacttaaaacggcag
agggttttggattcaccatcttcacctcctgaagagtcacttgtgccttataatgacgat
gaagatgatgaaaggagagcattgaatcacataggcagcagagaagaagatggtcacaga
gttaaaagtgaagaagaagatgatgaagatgaagatgatccatatgggctaggagcaact
ccagggaggtcaaatcgccaggttgaagtgcgtagagactgcccttacctcgatactgtt
aaccgccaggttctggattttgatttcgagaaattttgttcggtctctttgtcgaatttg
aatgtgtatgcatgcctggtctgtgggaagtattaccaaggaagagggaagaagtcccat
gcatatactcatagtctagaagcaggacatcatgtctacatcaatcttcgaacagagaag
gtgtactgcctccctgatgggtatgaaattaatgacccatcattggatgatattcgccat
gttctatacccaaggttttccagagaacaacttgaacaacttgataagaacaagcaatgg
tctagggcacttgatggttcagattaccttcctgggatggttgggctgaataatattcaa
aagactgattttgtcaatgtcaccattcaatctttaatgagagttactcccttaagaaac
ttcttccttatccctgagaattaccagcactgtagatctcaacttgttcatcggtttgga
gaactcacacgaaagatttggcatgctcgaaactttaaaggacaggtgagcccacatgag
tttctacaggcagttatgaaagcaagtaaaaaacggtttcgaataggcgtgcagtgtgaa
ccagttgaattcatgtcatggcttcttaacacattgcatgcagatcttagaacttcgaag
aaaagtagcagcatcatccataagtgctttcagggggaactggaggttgtgaaagagact
cagagcaaagctatcagtgagaagaaagaaagtgatggggaacagaatggagcattaaag
attacagatggtcaaattgagaataataatgttgcggctgaaacatacagaatgcccttt
ctgatgcttggtctggatttgccagaaccaccacttttcaaagatgtgatggagaaaaat
ataatacctcaggtacctttgtttaatatactaaagaagtttgatggtgagatggtaaca
actactgttcgtcctcctgcaagaatgagatatcgagtcaccaaattgccacagtatttg
atacttcatatgcgccgatttactaagaataatttcttcagagaaaagaacccaacattg
gtgaactttccagtgaaaaacctcgagttgaaagactacattcctttgccagcaccaaca
aaggagaatgaaaagttgcgcaccaagtatgatttaattgctaatgtcgttcatgatggt
aagcctgacgagggattctacagagtctttgtacagcggaaatcggaagaactatggtat
gaaatgcaagatctgcatgtttctgaaacacttcctcagatggttgcattatctgaagct
tatatgcagatatacgaacagcaacagtag
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