Gossypium raimondii: 105772093
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Entry
105772093 CDS
T04129
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
gra
Gossypium raimondii
Pathway
gra00040
Pentose and glucuronate interconversions
gra01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
105772093
Enzymes [BR:
gra01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
105772093
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
105772093
NCBI-ProteinID:
XP_052488088
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Position
6:54039975..54041204
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AA seq
378 aa
AA seq
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MATTLSCCFTLAVFMAILMASPSLSLANMNVIDKCWRGKPLWRSQRQQLAKCSVGFAGKM
INNIGKDVMKYKVTDPSDDPLSPKSGTLRYGTTMIKGKVWITFKNSMTITLQRPLLLSSF
TTIDGRGVDVHITGAGCLLVYQATDIIIHGLRIHHCKAQPPSTVMGPNAKVIPLGQMDGD
AIRLVTARKVWIDHNTLYECQDGLLDVTRGSTNITVSNNWFRNQDKVMLLGHDDGHLRDK
NMKVTVIFNHFGPNCNQRMPRVRHGYAHVANNFYQGWEQYAIGGSMSPSIKSEANFFIAP
NDVGNKEVTWRKGEKGLWKFYSVQDVFKNGASFSKQTGVGGAKPNYNQEQNFKVVDAGSV
KELTSESGVLRCSRSLIC
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atggctacaacattatcttgttgcttcacattggccgttttcatggccattctaatggca
agtcctagtttgagtttggctaatatgaatgtaatcgataaatgttggagagggaaacct
ctttggcgaagtcaacgacaacaattggccaaatgctctgtcggttttgccggcaaaatg
atcaacaacattggtaaagacgtcatgaaatacaaggttacagatccttctgacgaccct
ttgagtcctaaatcagggacccttcgttatggaaccacaatgatcaaaggaaaagtatgg
atcacattcaaaaatagcatgaccatcacactccaaagaccacttcttttaagcagcttc
actaccatcgacggtcgtggcgtcgatgtccacataactggcgctggctgcttgttggtg
taccaagcgaccgatataatcatccatgggcttcgcatccaccattgcaaggcccaacca
cctagcactgtgatgggtccaaatgcgaaggtgatccctttaggccaaatggatggagac
gctataagattggtcaccgcaagaaaagtgtggattgatcataacacattgtatgagtgc
caagatggcctcctcgatgtcactcgcggttccaccaacatcaccgtgtcgaacaactgg
tttaggaaccaagacaaagttatgctcctcggacatgacgatggtcatttgagagacaaa
aacatgaaggtcactgtcattttcaaccattttggacctaactgcaaccaaagaatgcca
agagttcgccatggatatgcacacgtagcgaacaatttctaccaagggtgggaacaatat
gccattggtggtagcatgagccctagcatcaagagtgaagccaattttttcatcgctcct
aatgatgttgggaacaaagaggtaacatggagaaaaggagagaaaggtttatggaaattt
tattcagtacaggatgtatttaaaaatggagcatcttttagtaagcaaacaggtgtaggt
ggagctaagcctaactataaccaagaacaaaattttaaagttgtcgatgctggatctgtt
aaggaattgacaagtgaatctggtgttttacgatgctccagaagtttaatatgttga
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