Gossypium raimondii: 105772103
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Entry
105772103 CDS
T04129
Name
(RefSeq) putative pectate lyase 2
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
gra
Gossypium raimondii
Pathway
gra00040
Pentose and glucuronate interconversions
gra01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
105772103
Enzymes [BR:
gra01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
105772103
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
105772103
NCBI-ProteinID:
XP_012448889
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Position
6:54107450..54108625
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AA seq
360 aa
AA seq
DB search
MATTLSCCFTVALFMVILMESLSSCLANMNVIDKCWRGNPLWRSQRQQLAKCSVDFVGKM
INNIRKDIAKYKVIHPSDDPLSPKLGTLHYGTTMIKGKVWITFKNSMTITLQRPLLLSSF
TAIDGRDIDVHITGAGCLLVYQATDIIIHGLRIHHCKAQPPSTVMGLNAKVIPLGQMDGD
AIRLVTTRKVWIDHNTLYECQDGLLDVTRGSTNITVSNNWFRNQDKVMLLRHDDGHLRDK
NMKVTVIFNHFGPKCNQRMPRVRHGYAHVANNFFQGWEQYAIGGSMSPSIKSEANFFIAP
NDVGNKEVTWRKGDKVLWKFYSVRDVFKNGASFSKQTGVGGAKPNYNQEQNFKVVDAGSI
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atggctacaacattatcatgttgctttacagtggctcttttcatggtcattctaatggaa
agtctgagttcgtgtttggctaatatgaatgtaattgataaatgttggagagggaaccct
ctttggcgaagtcaacgacaacaattggccaaatgctccgtcgattttgtcggcaaaatg
atcaataacattcgtaaagacatcgcgaaatacaaggttattcatccttccgacgaccct
ttgagtcctaaattagggacccttcattatggaaccacaatgatcaaaggaaaagtatgg
atcacattcaaaaatagcatgaccatcacactccaaagaccacttcttttaagcagcttc
acagccattgacggtcgtgacatcgatgtccacataactggcgccggatgcttgttggtg
taccaagcgaccgatataatcatccatgggcttcgcatccaccattgcaaggcccaacca
cctagcactgtgatgggtctaaacgcgaaggtaatccctttaggccaaatggatggagac
gctataagattggtcaccacaaggaaagtgtggatcgatcataacacattgtatgagtgc
caggacggcctcctcgatgtcactcgcggttccaccaacatcaccgtgtcgaacaactgg
ttcaggaaccaagacaaagttatgctcctcagacacgatgatggtcatttgagagacaaa
aacatgaaggtcactgtcattttcaaccatttcggacctaagtgcaaccaaagaatgcca
agagttcgccatggatatgcacacgtagcgaacaatttcttccaagggtgggaacaatac
gccattggtggtagcatgagccctagcatcaagagtgaagccaattttttcatcgctcct
aatgatgttgggaacaaagaggtaacatggagaaaaggagataaagttttatggaaattt
tattcagtacgggatgtatttaaaaatggagcatcttttagtaagcaaacaggtgtaggt
ggagctaagcctaactataaccaagaacaaaattttaaagttgtcgatgctggatctatt
tag
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integrated database retrieval system
