Gossypium raimondii: 105772513
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Entry
105772513 CDS
T04129
Name
(RefSeq) protein REDUCED CHLOROPLAST COVERAGE 3 isoform X1
KO
K03255
protein TIF31
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
gra03012
]
105772513
Translation factors [BR:
gra03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
105772513
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_10
eIF3_p135
TPR_NPHP3
TPR_2
CLU_N
TPR_8
TPR_9
PAM2
TPR_MalT
TPR_1
CLU
Motif
Other DBs
NCBI-GeneID:
105772513
NCBI-ProteinID:
XP_012449257
LinkDB
All DBs
Position
6:complement(32242862..32258472)
Genome browser
AA seq
1715 aa
AA seq
DB search
MAPRSGKSKSSKAKAEKKRKEEKIVPYVLDITVTTPYETQVVLKGISTDRILDVRRLLAS
HVETCHLTNYSFAHEVKGKRLSDKVEMVTLKPCLLKMVEEKYAEEAEAVAHVRRLVDIVA
CTSRFSRTKRPRSQSLSAPSDSKAEKVNRPNNSALPPAPSNGETTPIPENLDMAAIHPTP
KLSEFYDFFSFSHLSPPILNLRKCDPKDVEGWRDGDYFVMQIKICNGKLIQVVASVKGFF
TVGKHFFQSHSLLDLLQNLSQAFANAYESLMKAFVGHNKFGNLPYGFRANTWLVPPPVAE
CPANFPSFPSEDEEWGGNGGGQGRNGEYDLRPWATDFSILASLPCKTEEERIIRDRKAFL
LHSQFIDVSIFKAVAAIQHVMNSRLNVKGHPDSVLHEDRTGDLSILVKHDSKDVKLECGV
KVAGHQSSDMTTNEIARRNLLKGITADENVVVHDTSALGTVIVRHCGYTAIVSVVGDVKK
EKSGAPDIEIDDQPDGGANALNTNSLRVLLHKSSPAEVTGGGQSNQSNLIDSKSSRCLVQ
RVIKENLTKLEENSVAPERTIRWELGFCWVQYLQKQETSTDATSKGPANDQEAEVAVKGL
GKQFKFLMKRDKKPSNISSTVEKEDNGSELCSEDVKSNLGQESNVELSSEMELKHLISKE
AFSHLEESGTGLHLKSAEELIKMACKYYDDIALPKLVTDFGSLELSPVDGRTLTDFMHLR
GLQMHSLGRVVRKLSKKSVLLNPFVKVIIGYLKSFLIGTRIVFNQVELSEKLPHIQSLCI
HEMITRAFKQVVKAVVASVEKIEDLPVVIASTLNFLLGSCRVDVNAPSANDDYLLKLMWL
RKFLAAKFGWKLKDEFQHLRKLSILRGLCYKIGLELVPRDYDMECQEPFRSCDIISMYPI
CKHVGCSSADGRTLLESSKIALDKGKLEEAVNYGTKALAKMIAVCGPYHRTTASAYSLLA
VVLYHTGDFNQAAVYQQKALDINERELGLDHPDTMKSYGDLSVFYYRLQHMEMALKYVNR
ALFLLHFTCGLSHPNTAATYINVAMMEEGMGNVHVALRYLHEALKCNQRLLGAAHIQTAA
SYHAIAIALSLMEAYSLSVQHEQTTLKILQAKLGPDDLRTQDATAWLEYFESKALEQQEA
ARTGTPKPDASIASKGHLSVSDLLDYISPDQGSKGSDVQRKQRRSKVLQISDKTHDTHHN
LQTDGAVFIDATDKATATVDINEIGTLTSIHPEEPEETDNISSIKATVTTEVVEDTTLDE
GWQEANSKGRSGNATGKKYGRKKPVFAKLKVNGCEYSNGRESGSRRDIISPAGKTVPKNI
IREMQTVKQSKSSSLNPRGTSIGLPASVSRGSSPSANLSAIASKSLSYKEVVAAPPGTVL
KPLSEPSEGKMEQSMCAETTNVEHGNNISVVDDVVDDNGETEGTQDTESQSEETTPEIDK
VSSCSQEKGLEAKGSKLSASAEPFNPGALYHPLNSVSVTCVYDVTASQGMLAEPVVPPVA
ARVPCGPRSPLFYRNNNSYGSFLRYQTPILEHNGFGSPRVMNPHAPEFVPSKIWQMTGTG
DLSGSEEAMNTEVKEVDKKSSREVNGSNPKKSSAEEKSELARQILLSFIVRSAKQNMDGE
CEALINDKRLNHSQNSSDAVTSDTAIIKILYGNEGKDLDSQSSSNKEPKALDINNKKPGD
GEGFTVVKKRRKNRQQLTNEVTGLYNQQSICASVR
NT seq
5148 nt
NT seq
+upstream
nt +downstream
nt
atggccccaaggtcagggaaaagcaagtcaagtaaagcaaaagctgagaagaagaggaaa
gaggagaaaattgttccttatgttcttgacatcactgtcactactccttatgaaactcaa
gttgtgctcaagggtatctccactgacaggatacttgatgtaagaaggctgttggcttct
catgtggagacatgtcaccttacaaactattcttttgctcatgaggtcaaagggaagaga
ttgagtgacaaagtggaaatggttaccttgaaaccatgtttgctcaaaatggttgaagag
aagtatgcggaggaagctgaggcggtggctcacgtgcggagactggtagatattgtagca
tgcacctccaggttctcgaggactaaacgtccccgatcacaatccttatcagcgccgtca
gattcaaaagccgaaaaggtcaataggcccaacaacagcgctcttccacctgcgccctcg
aatggcgaaacgacgccaattccggagaacttggacatggctgccattcatcccaccccg
aaattatcggaattttacgatttcttctcattctctcacctctctcctcccattctcaat
ttgaggaaatgtgaccccaaggatgtagaagggtggcgtgacggtgactattttgtaatg
cagataaaaatctgcaacgggaagttgatacaagtggttgcatcagtaaaagggtttttc
actgttggaaagcacttcttccagagccactctttgttagatcttttgcaaaacctcagt
caagcctttgccaatgcatatgaatcccttatgaaggcatttgtaggacacaataagttt
ggtaatcttccctatggatttcgggcaaatacatggcttgtccctccccctgttgctgag
tgtccagcaaacttcccctctttcccatcagaagatgaagaatggggtggtaatggtgga
ggtcagggaagaaatggtgaatatgatcttcggccatgggctacagatttttcaatttta
gccagccttccttgcaaaaccgaagaggagaggattattcgagaccgcaaggcctttttg
ctccatagccagtttattgatgtctcaatctttaaagctgttgctgcaatacaacatgtc
atgaattccagattaaatgtcaagggccatccagactccgtccttcatgaggatcgcaca
ggtgacttgtccattttagtaaaacatgactcgaaagatgtgaaacttgagtgtggggta
aaggttgctggccatcaatcatctgacatgactaccaatgaaattgctcgaaggaattta
cttaaagggataactgcagatgagaatgtagttgttcatgatacttctgcattgggcact
gtcattgttagacattgtgggtacactgcaattgtaagtgttgttggtgatgtgaagaag
gaaaaatctggtgctccggatattgaaattgatgatcaaccagatggaggagcgaatgct
cttaatactaacagcctaagggttttacttcacaaatctagccctgcggaagtaactggt
ggaggacagtcaaatcagtccaacttgattgattccaaatcttctagatgtcttgttcag
cgagtaattaaagagaacttgacaaaattagaggagaactcagttgcccctgaaaggact
attagatgggaacttggtttttgttgggtgcagtatctacaaaagcaggaaacttcaaca
gatgctacttcaaaaggacctgcaaatgatcaggaggctgaagttgctgtcaaaggtctt
ggaaagcagtttaaatttttaatgaaaagggacaaaaaaccaagtaatatcagtagcaca
gttgagaaggaagataatggttctgagttatgcagtgaagatgtgaagtctaatttagga
caggaaagtaacgttgagttgagcagtgagatggaattgaagcacctgatttctaaagaa
gccttctcacatcttgaagaaagtggaactggtcttcacttaaagtcagctgaggagctt
attaagatggcatgcaaatattatgatgacattgctttaccaaagctggtaacagatttt
ggatcgcttgaactttctcctgttgatggtcgtacgctaaccgacttcatgcatttaagg
ggattacagatgcactctttgggtcgtgtggtgaggaaactctcaaaaaaatcggtcctc
ttgaatccttttgtgaaagtgattattggttatcttaaatcctttcttattggcactagg
atagttttcaatcaggttgaactttctgagaagcttcctcacatacaatcactttgcatc
catgagatgattactcgagctttcaagcaagtagtgaaagcagttgtggcatcagttgag
aaaattgaggatttacctgtggttatagcttcaaccctgaatttcttacttggaagttgc
agagtggatgttaatgccccaagtgcaaatgatgactatttactcaaactgatgtggtta
agaaagtttcttgcagcaaaattcggttggaaactgaaagatgaattccaacatttaagg
aaactttctattcttcgcggactttgctataagattggtctagagttggttcctagagat
tatgatatggaatgccaagaaccgttcagaagttgtgatattattagcatgtatcctatt
tgtaagcatgtaggatgctcttctgctgatggccgaacattgttggagtcatccaagatt
gctcttgacaaaggaaaactagaggaggcggttaactatgggacaaaggcattggcaaag
atgatagctgtatgcggtccttatcatcgaactactgcgagtgcttacagtcttcttgct
gttgttctctaccatactggagatttcaatcaggcagccgtatatcaacagaaagctttg
gatattaatgagagggagctcggtcttgaccatccagataccatgaaaagctatggggat
ctttctgtattctattatcggctccaacacatggaaatggctttgaaatatgtaaaccgt
gccttattccttcttcattttacttgtggattgtctcaccctaacactgccgcaacatat
ataaatgtggctatgatggaagaaggcatgggaaatgttcatgttgctcttagatatcta
catgaagctcttaagtgcaaccagagactgctaggagctgctcacatacagactgccgca
agctatcatgctattgccattgctctttcattgatggaagcttattcattaagtgtgcaa
catgagcaaactacactcaagatacttcaagcaaaactcggaccagatgaccttcgtacc
caggatgctaccgcctggcttgaatattttgaatcaaaagctctagaacagcaagaagcg
gcacgaactggaactccgaagccagatgcatcaattgcaagcaaaggtcatcttagtgta
tcagatctcctcgattacattagtcctgatcaaggttctaaaggaagcgatgtgcagagg
aagcagcggcgttccaaggtgttacagattagtgataaaacccatgatacacatcacaac
ttacaaacagatggtgctgtgtttattgatgcaacagataaagctacagcaactgtggat
attaatgaaataggtaccctgacttctattcatcccgaagaaccagaggaaaccgataat
atttctagtattaaggcaactgttacaactgaagttgttgaagatacaactttagatgaa
gggtggcaagaagccaattcgaaaggtcggtcaggaaatgccactggaaagaagtatgga
aggaagaaaccagtttttgcaaagctaaaggtgaatggttgtgaatattcaaatggtaga
gagagtgggagtaggcgagacattatctcaccagcaggaaaaactgtcccgaagaacatt
ataagggaaatgcaaacagtaaagcaatccaagtcttccagcttgaatcctagagggact
tcaattggtttacctgcttctgtttccagaggttcctccccttcagcaaatcttagtgcc
attgcttcaaaatcactttcttacaaagaagtagttgcggcacctccaggtacagttcta
aagccattatcggaaccaagtgagggaaaaatggaacagtcaatgtgcgccgagacaaca
aatgtagagcacgggaacaacatctctgttgtcgatgatgtagtggatgacaatggtgaa
actgaaggaactcaagatacagaaagtcagtcggaagaaactactcctgaaattgataag
gtgtcttcttgtagtcaggaaaaaggtttagaagcaaaggggagtaagctatcggcatca
gctgaaccattcaatcccggagcactctatcaccctttaaactcagtttctgttacatgt
gtttatgatgtaacagctagtcaaggcatgcttgctgagcctgttgtacctccagttgct
gctcgagttccttgcgggccaaggtcgccattgttttacagaaacaataattcttacggt
agctttcttagataccaaactcctattttggaacacaatggatttggatctccgagagtt
atgaaccctcatgcacctgagttcgttccaagcaaaatttggcaaatgactggaactggt
gatttgagtggctctgaagaagctatgaacacagaagtgaaggaagttgataagaagtcg
agtagggaagttaacggttctaatccaaaaaagagcagcgcagaggagaaatccgagctg
gcaaggcagattttgcttagcttcattgtccggtctgccaagcagaacatggatggtgaa
tgtgaggctttaatcaatgacaaaaggctcaaccattcccaaaactcttcggatgcagtt
acaagcgacactgcaataataaaaattctatatggaaatgaaggaaaggacttggattct
caatccagtagcaataaagaaccaaaagcgttggatataaataataagaaacccggagat
ggcgaaggctttacagttgtaaagaaacggcggaaaaacaggcagcagcttactaatgaa
gtcactgggctatataatcagcaatccatatgtgcttctgtaaggtga
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