KEGG   Gossypium raimondii: 105772624
Entry
105772624         CDS       T04129                                 
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.1 isoform X1
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
gra  Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:gra00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:gra04812]
    105772624
Cytoskeleton proteins [BR:gra04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     105772624
SSDB
Motif
Pfam: Katanin_con80 WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_EML Beta-prop_SPT8 Beta-prop_SCAP WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_DCAF4 NBCH_WD40 Beta-prop_WDR75_1st eIF2A WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_EIPR1 Beta-prop_Vps41 Beta-prop_IFT122_1st WD40_RFWD3 Beta-prop_HPS5 Beta-prop_IP5PC_F Beta-prop_VPS8 Beta-prop_WDR19_1st Beta-prop_WDR75_2nd
Other DBs
NCBI-GeneID: 105772624
NCBI-ProteinID: XP_012449464
UniProt: A0A0D2UIW1
LinkDB
Position
6:59855237..59865345
AA seq 927 aa
MAKRGYKLQEFVAHTANVNCLSMGKKTRRLFITGGDDHKVNVWSIGKPTSLMSLCGHTSP
VESLAFDLAEVFVLAGASTGVIKLWDLEETKMVRGLTAHRSNCTAMEFHPFGEFFASGSM
DTNLKIWDIRKKGCIHTYKGHTRGISTIQFTPDGRWVVSGGFDNVVKVWDLTAGKLLNEF
KFHEGHIRSIDFHPLEFLLATGSADGTVKFWDLETFELIGSSRPEATGVCSITFHPDGKT
LFCGLDDGLKVYSWEPVVCHDSLDIRWSTLGDLCINEGKLLGFSYYRNSVGVWGADVSHI
EPYGRNDHSEKKFNLEGSYSSEKAGSGMRSTLGSRPLSLDYETKEIKNIYVDTAGSNTIA
APKDGSLSSTEVVLPLDAGEISNPEAEEQSPGTGVNAKSNGQSGNNPVVKETTNSGKESI
TFSRTKPGMLLRPVHARKPSVNKFEVEKLSAVVESGRLDTAMDKNSRTSLVLEDGAKKPC
DEKDSNIETVTEKPEKMLSPQTPSNQETRNESLDHNKGSNSVKFVNGVAVVRGRTRSLVE
RFERRDLLNCSGDLATDSIAPAVLEADKTPAIIEGGTKISKTQPISANDVSTAESQSSRT
EPASSCEGGITASPIPTRESTPTSIGIISGDQISRRESTFTPGRMIARNQNSRKESTFAS
DRIVTINRISRRESTSTSDRVITKNQITRNELTSISDGIISRNQHSRKEAAAANDMSGPN
GLHTENQVSRRGFNSGNDRNVTNIESQISKDESISTNDGNLTESLMQTHDTFLSTLRSRL
TKLQVVRHFWEKNDIKGSIGALRKLPDHSVQADVIGVLMEKMEILNLDLFSGLLPVLMGL
LDSKMERHTNISLEMLLKLVAVFGPMIRSTVSARRSVGVDLHAEQRRECCNQCFMQLQKI
QKLLPPLVRRGGTIARGAQELNLALQE
NT seq 2784 nt   +upstreamnt  +downstreamnt
atggcgaagcgtggatacaagctgcaggaatttgtggctcatacggctaatgtgaattgt
ttaagtatgggaaaaaagacacgtaggctttttattacaggcggagatgatcataaagtc
aatgtttggtcaattgggaaacccacttctttaatgagtctttgtggtcatactagtccg
gtcgaatctttagctttcgatttggccgaagtttttgtgcttgccggtgcatctacaggt
gtgattaagctttgggatctcgaagaaacaaagatggttcgtggacttactgcacataga
tctaattgcactgctatggagtttcatccgtttggcgagttttttgcatctggttccatg
gatacaaatttgaagatatgggatattagaaaaaagggatgcattcacacgtacaagggt
catactcgaggcattagtacgattcaattcactcctgatggccgttgggtagtttctggt
ggatttgataatgttgtaaaggtgtgggatcttactgctggaaaactcttgaatgagttc
aagtttcacgaaggacatattcgctccatagatttccatcctctcgagttcctcctcgcc
acaggttcagcggatggaacggtaaaattctgggacttagaaacttttgaactgatcgga
tcttcgagacctgaggctaccggggtttgctcgattacctttcaccctgatgggaaaacc
cttttctgtggattggatgatggtttgaaggtttattcatgggagccagtggtttgtcat
gattctcttgatatcagatggtcaacacttggtgacctctgcatcaatgaaggcaagctt
ttggggttctcgtactatagaaattctgttggagtttggggagcagatgtatcgcatatc
gagccatatgggcgaaacgaccattctgagaagaaatttaatcttgagggaagttattca
tcagagaaagcagggagcggcatgagatcaactttgggatcacggcccctatctcttgat
tacgagaccaaggaaataaagaacatatatgttgacacagctggcagtaatacgattgct
gcaccaaaagacggctctttgagttctacagaagtggtacttccgttggacgccggtgaa
ataagtaatccagaagctgaggagcagagtcctggaacaggagttaatgctaaatctaat
ggacaatcaggtaacaaccctgtcgtgaaagagactacaaattcgggaaaagaatctatc
accttttcaaggacaaaaccaggaatgttgctcagacccgttcatgctagaaaaccatcg
gtcaacaagttcgaggttgaaaagctatcagctgtggttgaatctggaaggttagacact
gcaatggataagaattctcgaactagtcttgtattggaagatggagctaaaaaaccctgt
gatgaaaaggattcaaacattgaaaccgttactgagaaacctgaaaagatgttatcaccg
cagacaccctctaatcaagaaactcgtaatgaatcactcgatcacaacaaaggctcaaac
tccgtcaaatttgtgaatggagtggctgttgttcgaggaagaacgcgtagtctggttgag
agatttgaacgaagagacttattaaactgcagtggtgatctggcaaccgacagtatagct
cctgctgtacttgaagcagataaaacaccggccataatcgaaggagggacaaaaatatct
aaaacacaacctatatcagccaatgatgtaagtactgccgaaagtcaaagttctagaact
gaaccagcttctagctgcgagggaggcattactgcaagtccgattcctacaagggaatcg
acccctacttccattgggatcatttctggagatcaaatttctagaagggaatcaaccttc
actcccggtaggatgattgctcgaaatcagaattctagaaaggaatcaaccttcgcctct
gataggattgttaccataaatcgaatttctagaagggaatcaacctctacttctgatagg
gtcattacgaaaaaccaaattactcgaaacgaattgacttccatttctgatgggatcatt
tctagaaatcaacattctagaaaggaagctgctgctgctaatgatatgagtggaccaaac
ggtctacatactgaaaatcaagtttctaggaggggattcaattccggtaatgatcggaat
gttactaatatcgaaagccaaatttcaaaggacgagtcgatatctactaatgacggaaac
ctgaccgaaagtctcatgcaaacgcatgatacattcttaagtactcttcggtcacgcttg
acaaagttacaggtggtgcggcatttttgggaaaagaatgacattaaaggttccatcggt
gcactgcgtaaactgccagatcattctgtgcaagctgatgttatcggtgttctcatggaa
aaaatggagattctcaacttagatctgttttccggcttgcttcccgtgcttatgggccta
ttagatagtaaaatggaaaggcatacgaatatctcattggagatgctcctaaagcttgta
gctgtttttggtccaatgatacgctcaactgtctcagcccgacgtagtgtcggtgttgat
cttcatgctgagcagaggcgagaatgttgcaatcaatgttttatgcaattacaaaagatt
caaaaacttctcccaccactcgtaaggagaggcggtacgatagcgcgaggtgcgcaggaa
ttgaatctggctcttcaagaatga

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