Gossypium raimondii: 105772651
Help
Entry
105772651 CDS
T04129
Name
(RefSeq) transportin-1 isoform X1
KO
K18752
transportin-1
Organism
gra
Gossypium raimondii
Pathway
gra03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105772651
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gra03019
]
105772651
03009 Ribosome biogenesis [BR:
gra03009
]
105772651
Messenger RNA biogenesis [BR:
gra03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
105772651
Ribosome biogenesis [BR:
gra03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
105772651
Pre-60S particles
105772651
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
TPR_IPO5
HEAT
HEAT_GCN1
TPR_IMB1
TOR1L1_N
IBN_N
TPR_DNAAF5
HEAT_2
HEAT_MROH2B_C
Vac14_Fab1_bd
PDS5
CEP104-like_TOG
HEAT_MROH2B_1st
CLASP_N
Adaptin_N
UTP20_N
Dopey_N
PSME4_C
Proteasom_PSMB
PHP_C
MXRA7_helical
Motif
Other DBs
NCBI-GeneID:
105772651
NCBI-ProteinID:
XP_012449505
UniProt:
A0A0D2PYL7
LinkDB
All DBs
Position
1:complement(106367..123157)
Genome browser
AA seq
894 aa
AA seq
DB search
MAAAGSASWQPQEEGLKEICGLLEQQISPYSSADKSQIWQQLQHYSQFPDFNNYLVFILA
RAEGKSGEIRQAAGLLLKNNLRTAYKLMSPAHQQYIKSELLPCLGAADKHIRSTVGTIVT
VVVQQGGILGWPELLQALVNCLDSSDLNHMEGAMDALSKICEDIPQVLDSDMPGLAERPI
KIFLPRLFQFFQSPHTSLRKLSLDSVNQYIMLMPSALYTSMDKFLQGLFVLANDPAAEVR
KLVCAAFVQLIEIHPSFLEPHLKNVIEYMLQVSKDTDDEVALEACEFWSVYCDAQLPYES
LREFLPRLIPILLSNMVYADDDESLVDAEEDESLPDRDQDLKPRFHTPRFHGSDDAEDDD
DDSYGIWNLRKCSAAALDVLSNVFGDEILPALMPIIEAKLSASGDEAWKDREAAVLTLGA
IAEGCINGLYPHLSEIVAFLIPLLDDKFALIRSISCWTLSRFSKYIVQDSGNKKGYEQFD
SVLTGLLRRILDTNKRVQEAACSAFATLEEEAAEELAPRLEVILQHLMCAFGKYQRRNLR
IVYDAIGTLADAVGEKLNQPVYLEILMPPLIAKWQQVSNSDKDLLRLLECFTSIAQALGT
GFSQFDQPVFQRCINIIQTQQLAKVDPISAGVQYDKEFIVCSLDLLSGLTEGLQGGIESL
VAQSNLRDLLLQCCMDDDSDVRQSAFALVGDLAKVCPVHLRPRLSEFLDVATNQLTTPKL
NETIAVANNACWAIGELAIKVRQEISPVVMTVISCLVPILQHAEQGVNKSVVENTAITLG
RLAWVCPDLVSPHMEHFMQPWCISLSMIRDDIEKEDAFRGLCAVVRANPSAALSSLVLMC
KAIASWDEIRNGELHNEVCQVLHGYKQMLRNGAWDQCMSALEPPEKDKLSKYQV
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggctgggagtgcttcgtggcagccacaagaagaggggttaaaggagatctgt
ggattactagaacagcagatttcgccatattcttcagctgataagtctcagatttggcaa
cagcttcagcactactctcagttccctgattttaacaactatctcgtttttatccttgct
cgagctgagggaaaatcaggagagattcgacaagcagctggtttgttgttgaaaaataat
ctcaggacagcatacaagttaatgtcgcctgcacaccagcaatatataaagtctgaattg
ttaccttgtttaggagcagctgataaacatattaggtccacagttgggactattgtaacc
gtggttgttcaacaagggggaattcttgggtggcctgagctgttgcaagctcttgtcaat
tgcttggatagcagtgacttaaatcacatggaaggtgccatggatgcattgtcaaagatt
tgtgaggatataccacaagtgctagattcagatatgcctgggttagctgaaaggcctatc
aaaatattccttcctcgtttatttcagttttttcaatctccacatacttctctgagaaag
ctttcattggattctgtaaaccaatacattatgttgatgccttccgctttatatacatcc
atggataaattccttcagggtttatttgtccttgctaatgaccctgctgcagaagtgcgg
aaattggtttgtgcagcatttgtccagctaattgaaatccatccatcctttctggagcca
catttgaagaacgtaattgaatatatgctgcaagtcagtaaggacactgatgatgaagta
gcactagaagcatgtgaattttggtctgtatattgtgatgcacagttaccatatgagagt
ttgagagaatttttgccacgtctaattccgattttattgtcaaacatggtttatgctgat
gatgatgagtcacttgttgatgctgaggaagatgagtctcttccagacagagatcaggat
ctaaaacctcgatttcatacaccgcgatttcatggttctgatgatgcagaagatgatgat
gatgactcctatggcatatggaacttacggaaatgcagtgcagcggctcttgatgttctg
tcaaatgtgtttggagatgaaattcttcctgctttgatgcctattattgaggccaagtta
tctgctagtggtgatgaagcttggaaagatagggaagctgccgtgttgactcttggtgca
attgctgaaggttgcattaatggtctttatcctcatttgtctgagattgtagcatttctg
attccccttttagatgataagtttgcactcataaggagtatttcttgttggacactttct
cgattcagcaaatacattgttcaggatagtggtaataaaaaagggtatgagcaattcgac
tcagttcttacgggtctcctgcgaagaatattggatactaacaagcgggtgcaagaggct
gcttgttcggcttttgcaacacttgaagaggaggctgctgaagagttggcaccgaggttg
gaagtaattttacagcatcttatgtgcgcttttggcaagtatcagagacggaatcttaga
attgtttatgatgctattggaactctagcagatgctgttggagagaaattgaatcagcca
gtttatcttgaaattctgatgccaccactcattgcgaagtggcagcaggtttcaaattct
gacaaagatctccttcgactgctggagtgcttcacgtccatagcacaggcattgggtact
ggattctctcaatttgatcagcctgtattccagaggtgcataaatatcatccagactcaa
caactggccaaggttgatcctatttcagctggagttcagtatgataaggagttcattgtg
tgctcacttgatttgctctctggacttacagagggccttcaaggtggaatagagagtctg
gttgcacagagcaatttgagggacctgcttttgcaatgttgtatggatgatgattccgat
gtgcgacaaagtgcctttgcacttgttggggaccttgcaaaagtttgccctgttcatttg
cgtcctcgtttgtctgaatttcttgatgttgcaactaaccaattgaccactcccaagtta
aatgagaccattgcagtggcaaacaatgcatgttgggccattggagagctagcaattaag
gttcgtcaagaaatttctccggttgtcatgacagtgatctcatgtttggttcctatcctt
cagcatgcagagcaaggggtaaacaagtcagttgttgaaaatactgcaattactctaggg
agacttgcatgggtgtgtccagaccttgtatcaccacacatggagcatttcatgcaacca
tggtgtatttctttgtctatgatacgtgatgatatcgagaaagaagatgccttccgaggt
ctatgtgcagtggtccgagcgaacccatcagctgctctgagttcacttgttttaatgtgc
aaagctattgcaagttgggatgaaataaggaatggagaactacataatgaagtttgccag
gtcttgcacggttataaacagatgctaaggaatggggcatgggaccaatgtatgtctgca
ttggagccacctgagaaagacaaactatcaaagtatcaagtataa
DBGET
integrated database retrieval system
