Gossypium raimondii: 105772687
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Entry
105772687 CDS
T04129
Name
(RefSeq) LOW QUALITY PROTEIN: WD-40 repeat-containing protein MSI3
KO
K10752
histone-binding protein RBBP4
Organism
gra
Gossypium raimondii
Pathway
gra03082
ATP-dependent chromatin remodeling
gra03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105772687
03083 Polycomb repressive complex
105772687
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gra03036
]
105772687
Chromosome and associated proteins [BR:
gra03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
105772687
Histone modification proteins
HAT complexes
HATB complex
105772687
HDAC complexes
Sin3A-HDAC complex
105772687
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
105772687
PRC2.2
105772687
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
105772687
Heterochromatin formation proteins
Other heterochromatin formation proteins
105772687
Chromatin remodeling factors
NuRD complex
105772687
NuRF complex
105772687
NuRF complex (fruit fly)
105772687
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
EIF3I
WD_LRWD1
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
Beta-prop_SCAP
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
ANAPC4_WD40
Beta-prop_SPT8
MIOS_WD40
Beta-prop_RIG_1st
DUF6922
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
105772687
NCBI-ProteinID:
XP_012449555
UniProt:
A0A0D2QY26
LinkDB
All DBs
Position
1:150281..152768
Genome browser
AA seq
410 aa
AA seq
DB search
MAGDSEMNPEQVEEEFSVWKKNTPFLYDLVISHPLEWPSLTVHWVPSSPXPYGPDPTFNV
HKLVLGTHTSGGAPDFLMIADAVLPTLASESNIAAKNDDPVIPKVEITQKMRVDGEVNRA
RCMPQNPVIIGAKTSGSDVFVFDYAKQAAAKEQEGDCVADLRLRGHEKEGYGLSWSPFKE
GYLLSGSQDHKICLWDLSSWPQDKVLDATHVYEAHESVVEDVSWHLKNENIFGSSGDDCM
LMIWDLRTNQTEQRVKAHDREINYLSFNPYNEWVLATASSDSTVGLFDVRKLTVPLHVLS
SHSGEVFQVEWDPNHETVLASSGDDRRLMIWDLNRIGEEQLEIELDADDGPPELLFSHGG
HKAKISDFSWNKNEPWVISSVAEDNTLQVWQLAESIYRDEDDTQTAEDLP
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgattcagagatgaacccagagcaggtagaagaagagttcagcgtatggaag
aagaacacccctttcctttacgatctcgtcatttctcaccctctcgaatggccttctttg
actgtccattgggttccttcttctccanctccttacggacctgaccctacttttaacgtt
cacaaactcgtcctcggaactcacaccagcggcggcgcccccgattttctaatgatcgcc
gacgcagttctccccactctcgcctctgaatccaatatcgctgctaaaaatgatgaccca
gttatccctaaggttgagataacacagaaaatgcgtgttgatggggaagtcaacagggct
agatgtatgcctcaaaacccggttattataggcgcaaagaccagtggctccgatgttttc
gtgtttgattatgccaagcaggctgcagctaaagagcaagagggtgactgtgttgctgat
ttgaggttgaggggtcatgaaaaggaagggtatggattatcatggagtccatttaaggag
ggttatcttttgagtggttcacaagaccataagatatgcctttgggacttgtcttcttgg
cctcaagataaggttcttgatgcaacccatgtttatgaggcccatgagagtgtggttgaa
gatgtgtcatggcatttgaagaatgagaatatatttggttcttctggtgatgattgtatg
ttaatgatctgggacttgcgcaccaaccaaaccgaacaacgtgttaaagctcacgataga
gagatcaattatttgtcattcaatccttataatgagtgggttctggctacagcatcgtcc
gactccaccgtaggtttgtttgatgtacgaaagctgactgtacctttgcatgttttaagc
agccacagtggagaggtcttccaggtagaatgggatcctaatcacgagacagtgctggca
tcttctggtgatgataggagattgatgatttgggaccttaacaggattggagaagagcaa
ttagaaattgaattagatgccgatgatggccctccggaacttctcttttctcatggaggc
cataaagctaagatttcagatttctcgtggaacaaaaatgagccatgggtgatttctagt
gtagctgaagacaacacacttcaggtgtggcaattggcagagagtatatatcgagacgag
gatgacactcaaactgccgaagaccttccatag
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