Gossypium raimondii: 105772721
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Entry
105772721 CDS
T04129
Name
(RefSeq) E3 ubiquitin-protein ligase UPL3
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
gra
Gossypium raimondii
Pathway
gra04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105772721
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gra04121
]
105772721
Enzymes [BR:
gra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
105772721
Ubiquitin system [BR:
gra04121
]
Ubiquitin ligases (E3)
HECT type E3
105772721
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
Arm
HEAT_EZ
ARM_ARMC5
Motif
Other DBs
NCBI-GeneID:
105772721
NCBI-ProteinID:
XP_012449594
UniProt:
A0A0D2QY32
LinkDB
All DBs
Position
1:complement(158521..167789)
Genome browser
AA seq
1889 aa
AA seq
DB search
MEFRTRKRAEAFTAAPSSSSSSSFDPTVRSNKRVRLSSSSAVATTTGTRVSRASGFLMDS
VTAESSSGSRGGSGKDNRTVSESLNLVSDKGKEKEEDLRISDRETDRDSGDNNESNSNHL
EGSSGLNMETTGGDEDDHNDNRGDVGSLQQNLTSASSALQGLLRKLGAGIDDFLPSSPMG
SSSSSHQNWRLKRILSGLSADGEEGRQVEALIELCEILSIGTEESLSTFSVDLFVPVLVG
MLNHESNPDIMILAARALTHLCDVMPSSCAAVVHYGAVSSFCAKLLTIEYIDLAEQSLLA
LKKISQEHPTPCLRAGALMAVLSYLDFFATGVQRVALSTAANMCRNLPSDAADYVMDAVP
PLTNLLQYHDSKVLEHASVCLTRISEAFASSPDKLDEFCSHGLVTQAASLISTSNSGGGQ
GSLSTPTYTGLIRLLSTCASGSPVGAKTLLMLGISGILKDILVGSDISANSAVPPTLSRP
AEQIFEIVNLANELLPPLPQGTISLPASSNIFFKGSVVKESPTSSSEKEDNTDGNASEVS
AREKLLHEQPDVLQQFGMDLLPVLIQIYGSSVNTSIRHKCLSVIGKLMYFSSAEMIQNLL
SVTNLSSFLAGILASKDPHVLVPSLKVAEILLEKLPATFSKMFVREGVVHAVDQLVLIGN
QNNTPSLASYVEKDNDSVSGMSSRSRRYRRRSYNSNPEGSSVEESKNPASLNIGSPPSSV
ETPTTNLRTVVSGCAKAFKDKYFPSEPGAVEFGMTEELLHLKNLCMKLNAGVDDQKTKAK
GKSKDSGSPLADISAAKEEYLIGVISEILAELSKGDGVSTFEFIGSAVVAALLNYFSCGY
FSKGIISDGNLPKLRHQALKRFKLFISVALPSSVDERSIAPMVVLVQKLQNALSSVEHFP
VVFSHASRSSGGSARLSFGFSALSQPFKLRLCRAHGEKSLRDYSSSIVLIDPLASLATVE
DFLWQRVQRSDTAQKLSISVGNSESGNTSSGAATSSTSTTTPASDTRRHFSRSRSSVSIG
DAATKEPSSQENRTRSSKGKGKVVLEMAQERLRGPQTRNAACRRAALGKDDPMKPVTGVS
TSEDEESDTFPVEVDDVWGVEDDDISDDEEDSHEDVLRDDSFPVCMPDKVHDVKLGDSAE
DGKPASAISDSQINTASGSSSRAAAVKCSDSADFRSAYGSKGAMSFAAAAMAGLGSVNGR
RIRGGRGLEGQHPFGSSNEPPKLIFTAGGKQLKRHFTIYQAIQGQLVLDEDEDDERCAVS
DISSEGSRLWSDIYTITYQRADSQADRSSVGGSGSTTESNSTKSGSSSSNSVPQTHRMSL
LDSILQGELPCDLERSNPTYNILALLRVLEGLNQLAHRLRFQIFSDNFAEGKISNLDELI
LTGSRVPSEEFINGKLTPKLARQMQDALVLCSGNLPSWCYQLTKSCPFLFPFETRRQYFY
STAFGLSRALYRLQQQQSADGHGSTNEREVRVGRLQRQKVRISRDRILDSAAKVMKMYSV
QKAVLEVEYFGEVGTGSGPTLEFYTLLSHELQKFELGMWRSNSTWNKSLMEIDGDEKKEG
KTAGSTTIDGVMIQAPLGLFPRPWQLNADASEGSEFSKVIEYFRLVGRVMAKALQDGRLL
DLPLSTSFYKLVLGEELDLHDIPSFDSEFGKILLELHLIVCRKKYLELMGDDSGDAIADL
RFRGAPIEDLCLDFTLPGHPDYILKPGDETVDINNLEEYISLVVDATVKTGIMRQMEAFR
AGFNQVFDIASLQIFTPQELDYLLCGRRELWEAETLADHIKFDHGYTAKSPVIINLLEIM
GEFTPDQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSPSESVDDDLPSVMTCANYL
KLPPYSTKEILYKKLLYAISEGQGSFDLS
NT seq
5670 nt
NT seq
+upstream
nt +downstream
nt
atggaatttcggacccggaagcgggcggaggcattcacagctgccccttcttcttcttct
tcttcttcctttgatcctacagttcgctctaacaagcgcgttcgtttgtcttcctcctct
gccgttgctaccaccaccgggactcgcgtttcacgggcttccggtttcttaatggactcc
gttacagcggaatcttcatctggttcccgcggaggttccggcaaagacaaccgaaccgta
agtgaaagtctgaatctcgtctctgataaaggtaaggaaaaggaggaggatttaaggatt
tcggatagagagactgatagggatagtggagataataacgagagtaattcgaaccatctt
gagggaagctcagggttaaatatggagaccactggaggcgatgaggatgatcataatgac
aacagaggcgacgtggggagtttgcaacagaatctgacgtcagcgagcagcgcattacaa
ggcttgttgaggaagttgggtgccggaattgatgattttcttccctcatcgccaatgggc
tcatcgtcgtcatctcatcaaaattggaggttgaagaggattctgtctggattgagtgct
gatggggaggaagggaggcaagttgaggcgttgatagagctctgtgagattctttcaatt
gggactgaggagtcattgagcacgttttctgtggatttgttcgttcccgttctcgttgga
atgcttaatcatgagagtaaccctgatattatgattcttgcggcaagggcgcttactcat
ttatgtgatgtgatgccttcttcctgtgctgctgtggtgcattatggtgcagtttcatct
ttttgcgctaagttgcttacaatagagtatatagacttggctgaacagtctctgctagcc
ttgaagaagatatctcaagaacacccaactccctgtttgcgagctggtgctctcatggca
gtgctttcatacctggatttcttcgccactggagttcagcgtgtggctctatcaactgct
gcaaatatgtgcaggaatctcccttcagatgcagctgactatgtaatggatgctgtacca
ccattaacaaatcttttgcagtatcatgattcaaaggtgttggagcacgcttctgtttgt
ctgacccgtatttctgaagcctttgcatcttccccggataaattagatgagttttgcagc
catgggttggttactcaagctgcatctctcatttccacaagtaattctggcggtggtcag
ggatctttgagcacaccaacatatacgggcttaatccggctgctttcaacatgtgcaagt
gggtctcctgttggagcaaaaactttacttatgcttgggatcagtggtatcctgaaagat
atactggtaggttctgacatctctgctaactcagctgttccaccgacgttaagcagacca
gctgagcagatttttgagattgtcaatctggcaaatgagcttcttcctccattgcctcaa
ggaaccatctccctccctgccagctctaatatatttttcaaaggatctgttgtgaaggag
tctcctactagtagctctgagaaggaagacaacaccgatggaaatgcttctgaggtttcg
gcccgagagaaattgttgcatgaacaacccgatgttctccagcaatttggcatggaccta
cttcctgttcttatacagatttatggttccagtgtcaatacctctattcgccacaaatgt
ctctcagttattggaaaacttatgtatttcagcagtgcagagatgattcagaatctattg
agtgtgacaaatttatcaagctttttggctggtattttagcatcgaaagatccacatgtc
ttggttccttcccttaaggttgcagagatcctattggaaaagcttcctgcaacattctcc
aaaatgtttgtcagagagggtgtggttcatgctgtggaccagcttgtattaattggtaat
caaaataacactccttctctagcatcttatgttgagaaggataatgactctgtatctgga
atgtcatcgcgttccaggcgttacagacgacgcagttataactcaaatcctgaaggaagt
tcagtggaggagtctaagaatccagcatctttaaatattggttctcctcctagttcagtc
gaaacccctacaacaaatcttcgtaccgttgtaagtggatgtgctaaagcattcaaagat
aagtatttcccctctgagcctggtgctgttgaatttggtatgactgaagagcttctacac
ttaaaaaatctttgcatgaaattgaatgctggtgttgatgatcaaaagactaaggcaaaa
ggaaaatctaaagattctgggtctccattggctgatatttctgctgccaaggaagaatat
ttgattggggtgatctctgagattctagcagaactgagcaagggggatggtgtatccact
tttgagtttattggtagtgctgttgttgcagccttgttaaactatttttcttgcggatac
ttttccaaggggataatttcagatggaaacctgcccaagcttcgccaccaagcccttaaa
agatttaaattatttatcagtgttgcacttccttctagtgtggatgaaagaagtattgct
cctatggttgtcctggttcagaagcttcaaaatgctttatcatcagtagagcatttccct
gtagtttttagccatgcctccaggtcatctggtgggagtgcacgcctctctttcggattt
agtgcattatctcagccttttaagttgcgtctttgtcgagcccatggagagaaatctctt
cgtgattattcatcaagtattgtgttgattgacccattagcaagtctagcaactgtagaa
gattttctttggcaacgagttcaacgaagtgatactgctcagaagctctccatttctgta
ggaaattctgaatctgggaacacatctagtggggctgctacttcttctacatctaccaca
actcctgcttcggacactcgtcgtcatttttcaaggtccagatcatctgttagtatagga
gatgcagccacaaaggaaccatcatcacaggaaaacagaacaagatcgtcaaagggaaaa
ggtaaggtagttttggagatggcacaagagaggttgagaggacctcagacaagaaatgct
gcttgtagaagagctgctctgggtaaagatgatccaatgaaacctgtaactggtgtctct
acttctgaggatgaagaatcggacacatttcctgtggaggttgatgatgtttggggggtt
gaagatgatgatatttctgatgatgaagaagatagtcatgaagatgtgctcagagatgat
tcttttcctgtttgcatgccagacaaagttcatgatgtgaaattgggtgattcagctgaa
gatggaaaacctgcctcggccattagtgatagccaaataaatacagcttcaggatctagc
agcagagcagctgctgttaagtgttcagactctgctgattttaggagtgcttatggctca
aagggtgctatgtcgtttgcagctgctgccatggctgggctaggaagtgtaaatggtaga
cgtattaggggaggtagaggtctggaagggcagcatccatttggtagttctaatgagcct
ccaaaattgatatttactgctggtggtaagcagctcaaaaggcattttacaatctatcag
gccatccagggacagcttgtgttggatgaggatgaggatgatgaaagatgtgctgttagt
gatatttctagtgagggaagcagactgtggagtgacatctacacaataacatatcagagg
gcagacagccaagctgaccgatcatctgttgggggatcaggttctactacagaatccaat
tctactaaatctggttcttccagctccaactctgttccccaaactcatagaatgtcactt
ttggacagcatcttgcaaggggaacttccttgtgatctagaaagatctaaccctacttat
aatatattggcactgttgcgtgtgttagagggtttgaatcagcttgcgcatcgattaagg
tttcagatattttccgacaattttgctgaggggaaaatttcaaatctagatgagttgatt
ctcactggttctagagttccttctgaggaatttattaatggtaagctcactccaaaactg
gctaggcaaatgcaggatgcccttgttctctgcagtggaaaccttccgtcctggtgttac
cagttgacaaagtcatgcccctttttatttccttttgagacacgaaggcagtacttttat
tcaactgcctttgggttgtctcgtgcattatatcgtcttcagcaacagcagagtgccgat
ggccatgggtcaactaatgagagagaggtgagggttggtagattacagcggcaaaaagtt
cgcatctcccgggaccgcattttggattctgctgcaaaagtaatgaagatgtattctgtt
caaaaagctgttcttgaagttgaatactttggagaagttggaactggatcgggtcctact
ttggagttctatacacttttaagtcatgagttgcaaaagtttgaacttggaatgtggagg
tcaaattctacatggaataagtcattaatggaaattgatggtgatgaaaagaaagaagga
aaaactgctggttccactaccattgatggagttatgattcaagctcctttagggttgttc
cctcgaccttggcagctaaatgctgatgcttctgaaggtagtgaattttctaaagtaatt
gagtatttccggctggtggggcgtgtgatggcaaaagctcttcaagatggacggctttta
gacctgcccctatcaacatcattttataaacttgtgcttggtgaagagcttgatttgcat
gatatcccgtcatttgactctgagtttgggaaaattttgctagaattacatcttattgtt
tgtcgaaagaaatatttagaattgatgggtgatgacagtggtgatgcaattgctgattta
cgcttccgtggagccccaatagaagacctttgtctggactttacacttcctggccatcca
gactacatattgaagccaggggatgaaactgtggatatcaacaacttggaggaatacata
tctttggtggttgatgcaactgtcaagactggaattatgcggcaaatggaggcatttaga
gctggatttaatcaggtttttgatattgcttcattacaaatatttactccgcaagagttg
gactatttgctgtgcggtcgcagagagttgtgggaggctgagacacttgctgatcacata
aaatttgatcacggatataccgcaaagagcccagtgatcattaatttactcgaaattatg
ggagaatttacaccagatcagcaacgggccttctgccaatttgttactggtgcccccaga
cttccacctggtggtctggcagtgctgaatcctaaactgaccattgttagaaagcattct
tcgccctcggaatcagttgatgacgacttgcccagtgtcatgacttgtgctaattacttg
aagcttcctccatattctaccaaggaaattttgtataaaaaattactatatgcaatcagt
gaagggcaagggtcttttgatttatcatga
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integrated database retrieval system
