Gossypium raimondii: 105772833
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Entry
105772833 CDS
T04129
Name
(RefSeq) squalene synthase 2
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
gra
Gossypium raimondii
Pathway
gra00100
Steroid biosynthesis
gra00909
Sesquiterpenoid and triterpenoid biosynthesis
gra01100
Metabolic pathways
gra01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
105772833
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
105772833
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
gra01006
]
105772833
Enzymes [BR:
gra01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
105772833
Prenyltransferases [BR:
gra01006
]
Terpene biosynthesis
Squalene/phytoene synthase
105772833
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Paralog
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Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
105772833
NCBI-ProteinID:
XP_012449773
UniProt:
A0A0D2Q5Z3
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Position
1:complement(238846..243684)
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AA seq
413 aa
AA seq
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MGSLGALMKHPDDFYPLLKLKMAARNAEKQIPSEPHWGFCFSMLHKVSRSFALVIQQLDT
ELRHAVCIFYLVLRALDTVEDDTSVAADVKVPILIDFYRHIYDPDWHFSCGTKEYKVLMD
QFHHVSAAFLELEKGYQEAIEDITLRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGL
SKLFHAYGSEDLAPESLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVKKL
EDLKDEENSVKAVQCLNDMVTNALLHVDDCLKYMSALRDPAIFRFCAIPQIMAIGTLALC
YNNIKVFRGVVKMRRGLTAKVIDRTKSMTDVYGAFYDFSYILKAKVDKNDPNAQKTVSRL
DSILKTCRDSGVLNKRKSYIIENQSNYTPFVVVLLFIIFAIFLVNLNPNWPNN
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggggagtttgggagcactgatgaaacatccagatgatttttatccgttgttgaaattg
aaaatggcggcgagaaatgccgagaaacagatcccatcggagcctcactggggtttttgt
ttctctatgcttcacaaagtttctcgtagtttcgctcttgttattcagcagctcgataca
gagcttaggcatgcagtttgcatattttatttggttcttcgagctcttgatactgttgag
gatgatactagtgttgcagcagatgtcaaagttccaattcttatagatttttatcgtcac
atatatgatcccgactggcacttttcttgtggtacaaaggaatacaaagttctcatggat
cagtttcatcacgtgtctgctgcttttctggaactcgaaaaaggttatcaggaggcaatt
gaggatattacactaagaatgggagcagggatggccaaatttatttgcaaggaggtcgaa
acagttgatgactatgatgaatattgtcactatgtagccggacttgtcggattaggtttg
tccaagctattccatgcctatggatcagaagatttggctccggaatcgctctccaattca
atggggttgtttcttcagaaaacaaatattatccgagattatctagaggatatcaatgaa
ataccgaagtcacgcatgttttggccacgccagatttggagtaaatacgtcaagaaactt
gaggacttgaaagacgaggaaaactcggtcaaggcggtgcagtgcttgaacgacatggtc
actaacgctttactacatgttgatgattgcctgaaatacatgtccgctttacgtgaccct
gcaattttccgattttgtgctatccctcagatcatggctatcggaacactagccttgtgt
tacaacaacatcaaagtcttccgaggtgtcgtgaaaatgaggcgcggtttaactgcgaaa
gtcattgatcgaacaaaatcaatgactgatgtctatggtgctttctatgatttttcttac
attttgaaagccaaggtcgacaaaaacgatcctaatgcacaaaaaaccgtgagccgactc
gattcaatcctgaagacttgccgagactcgggtgtgctaaacaaaaggaaatcatacata
atcgagaatcagtccaattacactccgtttgtggttgttttgcttttcatcatattcgcc
atctttttggttaacctgaacccaaactggcctaataactag
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