Gossypium raimondii: 105773034
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Entry
105773034 CDS
T04129
Name
(RefSeq) uncharacterized protein LOC105773034 isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
gra
Gossypium raimondii
Pathway
gra03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105773034
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gra03019
]
105773034
Messenger RNA biogenesis [BR:
gra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
105773034
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
GTP_EFTU_D4
Zn_ribbon_RanBP
Mg_chelatase
RUBY_RBDX
Motif
Other DBs
NCBI-GeneID:
105773034
NCBI-ProteinID:
XP_012450070
UniProt:
A0A0D2SRJ9
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Position
6:complement(25327995..25333763)
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AA seq
680 aa
AA seq
DB search
MPRKVNYGLDYDDDYDDNYDEYDYGYEVNENAETPPQKETIKHSVWRCSICTYDNDETMS
SCDICGVLHGPLLNNSIYDKKRTANIFDLKSSRVSSTVVGRDEAVKVSSMRSDSSNQSTE
KGKHNRLDEINILKNIEVGPPAGSRTSDNCSASVQEGWLGHVDESSVAVNLRSSGKSSLS
LMPKERNVMVDDSSSSRNGGEANSLTSNLENISFAAKSGHSNDANPGRAISRAQYKPEKW
MLPEKAEQSLTQLNLAIVGHVDSGKSTLSGRLLHLLGRISQKEMHKYEKEAKLQGKGSFA
YAWALDESAEERERGITMTVAVAYFDSKRYHVVVLDSPGHKDFVPNMITGATQADASILV
IDASIGSFEAGMDGTKGQTREHAQLIRSFGVDQLIVAVNKMDAVDYSKERFDLIISQLGA
FLRSCGFKDSSVSWIPLSAVENQNLVSAPSDFRLFWYLGPNLLDAIDSFQPPTREFSKPL
IMPICDVIKSPSQGQVSACGKLEAGAVRSGSKVLVMPSATIATVRSLERDSEACPIGRAG
DNIAVSLNGIDGNHVMAGGVLCHPDFPIAFAKHLELKVLVLDGATPILIGSQLEFHIHHA
KEAARVARISLLLDSKTGKVVKKAPRCILAKQSAVVEVILQEAVCVEEFSKCKVLGRVFL
RTLGRTVAVGIVTRIVEEQQ
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgaaaagttaactatggacttgattatgatgatgattatgatgataactacgac
gaatatgactacggatatgaagtaaatgaaaatgcagaaacacctccccaaaaagaaaca
atcaaacacagtgtgtggcgttgctccatttgtacatatgataatgatgaaaccatgtca
tcatgtgatatttgtggggttcttcatggtcctttgctcaataactccatctatgataag
aagagaacagccaatatttttgacttaaaatcttccagagtttcctcgactgtggttggg
agggatgaagctgttaaagtaagttctatgagatcagatagttcaaatcagtcaacagaa
aaaggcaagcacaatagattagatgagattaatattttgaagaatatagaagttggtcca
ccagcaggttccagaacttcagataactgttctgcttcagtgcaagaaggttggcttggt
catgtggatgaaagcagtgttgcagttaatctgcgatctagcgggaaaagctctttgtca
ttgatgccaaaagaaagaaatgttatggtggatgatagcagctcttcaaggaacggaggt
gaggcaaatagtctcaccagtaatctggaaaatatttcttttgctgctaaatccgggcac
tccaatgatgcaaaccctggaagagcaatttcacgggcacagtataaacctgaaaagtgg
atgctccctgaaaaagcagaacagtcactgactcaactaaatcttgcaattgttgggcat
gtggattcgggaaaatcgacgctctctggtagactgcttcaccttttgggaagaatatcc
caaaaagaaatgcacaaatatgaaaaggaggccaaattacagggaaaaggatcctttgct
tatgcttgggcattggatgaaagtgctgaagaaagagaaaggggaattactatgactgtg
gctgtggcttattttgattcaaaaagatatcatgttgttgtccttgactccccagggcac
aaagactttgttccaaacatgataactggggcaacacaagctgatgcttcaattcttgta
atagatgcttctattggttcatttgaagctggtatggatggcaccaaggggcagactagg
gagcatgcacaactcatccgaagttttggcgttgatcaacttatagttgctgttaacaaa
atggatgctgtagattattctaaggaaaggtttgatttgataatatcacagcttggggca
tttctccgttcttgtggctttaaggattcctctgtctcttggattccattgagtgctgtt
gaaaaccagaacttagtgtctgcaccttcggattttcgactattctggtatcttggaccc
aatctgttagacgcgattgattccttccaacctcctactagggagttttcaaagcctcta
attatgcctatatgtgatgttataaagtcaccttcacaagggcaggtgtctgcatgtggc
aagttggaggctggagctgtaagaagcggatcaaaggttttagttatgccatctgcaact
atagcaactgtgcgttcattggagcgtgattccgaagcttgcccaattggaagggctgga
gataatatagctgtcagcctgaatggaatagacggaaaccatgtgatggctggtggtgtg
ttatgtcatcctgattttccaattgcatttgcaaaacatttggagttgaaggtgcttgtt
ttggacggtgcaactccaattttaattggttctcagttggagtttcacatacaccatgca
aaggaggctgcaagagttgcaaggatatcattgttacttgattcaaagactgggaaagtt
gtgaagaaagcaccccgctgcattcttgctaagcagagtgcagttgttgaggtgattttg
caggaagcggtttgcgtggaagagttttcgaaatgcaaagtccttggaagggtgtttctt
aggacattaggaagaacggttgctgtgggcatcgtgacccgaatagtggaggagcagcaa
tag
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