Gossypium raimondii: 105773037
Help
Entry
105773037 CDS
T04129
Name
(RefSeq) putative E3 ubiquitin-protein ligase RING1a isoform X1
KO
K10695
E3 ubiquitin-protein ligase RNF1/2 [EC:
2.3.2.27
]
Organism
gra
Gossypium raimondii
Pathway
gra03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
105773037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gra04121
]
105773037
03036 Chromosome and associated proteins [BR:
gra03036
]
105773037
Enzymes [BR:
gra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105773037
Ubiquitin system [BR:
gra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
105773037
Chromosome and associated proteins [BR:
gra03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
105773037
Noncanonical PRC1 (PRC1.1)
105773037
Noncanonical PRC1 (PRC1.3/1.5)
105773037
Noncanonical PRC1 (PRC1.6)
105773037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-RING_5
zf-C3HC4_4
zf-RING_6
zf-UDP
zf-C3HC4_5
ZNF512_C2HC
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
105773037
NCBI-ProteinID:
XP_012450086
UniProt:
A0A0D2UD34
LinkDB
All DBs
Position
6:41180760..41185998
Genome browser
AA seq
487 aa
AA seq
DB search
MPAQKPSSEAVFTPEGSDLLLLDQSINNHEQHPVETEDAADESDRCPCPCNENEQDYVIV
KLSDVRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMRMGNNECPACRTHCASRRSL
RDDPNYDSLIAALYPDIEKHEEEELTLHEEEKARNKQIQASITQTLHRQLEVLGRKRTVK
ANASATIRRSNCRYQRRKYRASEPQESDNNEDANENGSTGSSLADEDLTEVKPKRLKRWE
GRCSQPSSAASADGVGDENDSEVNRESLGVSAALSPSERLHLGASGIRSHTAHGSLSGDE
NDSEVNRESLGLFAALNGLSERLHWGAGGMRSNTRHGSLSGGNGKKARNSRLPKLVDCLQ
NLEEKDDELDIHLMLVSIDEQRIPCLQRPYLCCRPTLLVRHLCQYVALQTALQASEIEIY
LVKELYSTANMSTYKITKPGLVESVRDKLEVLKEEETLGGLGRQTSSHSHLILAYQKKEN
RNGQCQV
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgccggctcagaagccttcttccgaagccgtcttcacaccagaaggcagcgatctcctg
cttctcgatcagagtattaacaaccatgaacaacaccccgtagaaaccgaagatgctgct
gatgaatctgatcgctgcccttgtccttgtaacgagaatgaacaagattatgttatagta
aaattatctgacgtacgtaaggaagtacagtgcccaatctgcctggggatcattcgcaaa
actagaactgtaatggaatgcttacatcgcttctgtagagaatgcattgacaaatctatg
cgcatggggaacaatgaatgccctgcttgccgcacacattgtgctagtcgccggtctttg
agagatgatcctaactatgattccctaatcgcagccttatatccagatatagaaaaacat
gaggaagaggaattgactttgcatgaggaggagaaagctcggaataaacagatccaagct
tcaatcacccagaccttgcatcggcaattagaagttctgggtaggaagcgaacagttaaa
gccaatgcgtctgcaactataaggagatcaaactgccgctatcaaaggagaaaatatcga
gcttctgaacctcaagagtctgataataatgaggatgccaatgaaaatggaagcacgggt
tcatctttggccgatgaggatcttactgaggtcaaaccaaagagattgaagagatgggag
ggtcggtgttctcagccttcatcagctgctagtgcagacggggttggtgacgaaaatgat
tctgaagtgaatagagaatccttgggtgtatctgctgcacttagtccctcagaaaggctt
cacttgggagcaagcggtattcgcagtcacacagcacatggcagtttgagtggtgatgaa
aatgattctgaagttaacagagaatccttgggcttgtttgcagctcttaatggcctctcc
gaaaggcttcattggggagcaggcggcatgcgcagtaacacaagacatggcagtttgagt
ggtggaaatggaaagaaagcccgaaacagccgcctcccaaagttggtggattgtctccag
aacctagaggagaaggatgatgagttggatatccacctgatgcttgtttcaattgatgaa
caaagaataccctgtttacagaggccttacctttgctgcaggcctacgttgttggttaga
cacctgtgccagtatgtagctcttcaaactgctttacaagccagtgaaattgaaatatac
ctggtaaaagagttatattctacggccaacatgtcaacctataagattaccaagcccggt
ttagttgaatcagtcagagataagttggaagttttaaaagaggaagaaactttgggtgga
cttggacgccaaacttccagtcatagccatttgattcttgcatatcagaaaaaggagaat
agaaatggacaatgtcaagtttag
DBGET
integrated database retrieval system
