Gossypium raimondii: 105773049
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Entry
105773049 CDS
T04129
Name
(RefSeq) protein REDUCED CHLOROPLAST COVERAGE 3
KO
K03255
protein TIF31
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
gra03012
]
105773049
Translation factors [BR:
gra03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
105773049
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
eIF3_p135
TPR_10
TPR_NPHP3
CLU_N
TPR_2
TPR_9
TPR_1
TPR_8
PAM2
TPR_16
TPR_MalT
ANAPC3
Motif
Other DBs
NCBI-GeneID:
105773049
NCBI-ProteinID:
XP_012450111
UniProt:
A0A0D2UHA0
LinkDB
All DBs
Position
6:complement(58141458..58150443)
Genome browser
AA seq
1644 aa
AA seq
DB search
MAPKSSSKSKSNKAKPEKKNKKKEEKVVPSVLDITVITPYESQVILKGISTDKIVDVKRL
LASHVETCHFTNYSLTHEVKGKRLNEKVEVATLKPCLLKMVEEDYTNEEQAVAHVRRLLD
IVACTTRFSKPKRVRSQSSSSDSKSKKVNGGPHHRPREPSDGGPGTAWIMESMEMAAIQP
TPKLSEFYDFFSFSHLAPPILNLRKCEPKDVEGRHEGDYFIMQIKICNGKQIQVVASVKG
FYTVGKHFFLSHCLLDLLQNLSQAFADAYESLMKAFIEHNKFGNLPYGFRANTWLVPPLV
ANSPSTFLSFPLEDEQWGGNGGGQGRNGEYDLQPWATDFAILANLACKTEEERVVRDRKA
FLLRSRFVDVSIFKAVATIQHVMNNRSIVKGTVNSHPDSVLHEDRIGDLSITVKQESADV
KVAGHHSFGMTANEIAQRNLLKGISADESAVFHDISSMGTVIVRHCGYIAIVKVVGEVKN
ELHSARDIDIDDQPDGGANALNINSLRVLLHKSGAKESSGGQSHQLNSNDSEPSRCLVRQ
VVKESLTKLEENSVVPERSIRLELGSCWLQCLQKQETLRDTTSNGLGRDHEAEPAVKGLG
KHFKCLKKRDKKPSNSGSKVDEEENDCEPCGMNQSIGESRNQMELKNLISEEAFSRLEES
RTGLHLKSVNELIKMAYEYYDDTALPKLVTDFGSLELSPTDGRSLTDFMHLRGLKMRSLG
RVVELAEKLPHIQSLCIHEMVTRAFKHVLKAVVASVDKFEDLPAAIASSLNFLLGNNGSE
DNAENANDDYLLKLRWLRKFLSAKFGWKLQDEFRHLRKLSILRELCHKVGLELVPKDYDM
ECKEPFESCNIISIYPVCKHVVCASADGRTLLESSKAALDKGKLEDAVNYGTKALAKMIA
VCGPYHRTTASAYSLLAVVLYHTGDFNQAIIYQQKALDINERELGLDHPDTVKSYGDLAV
YYYQLQHFEMALKYVNRSLFLLHFTCGLSHPNTAATYINVAMMEEGMGNVHVALRYLHEA
LKCNQRLLGADHIQTAASYHAIAIALSLMEAYSLSVQHEQTTFKILQAKLGQDDLRTQDS
AAWIEYFESKALEQQEAARNGTPKPDASIASKGHLSVSDLLDYISPDQDSKGTDVQKKLL
RAKVLQTSDKTHDACHNFVTDSSVFNGVSEKSISTADINERRMVSSICLEEPKKTNDVTR
VEPMVTSEVFEETTSDEGWQEANSKGRSGNAVGRKSRRKRTALANVRVSGSRRETIFPVR
KTSSKNIVKEVVPVKQLMSHNSNPGGNSVSLRASVSKGSLSSANLSAVASKCLSYKEVAV
APPGTVLKPLHEGETEHQVCTIRTETTKSEDGDHMSVIDNVVDNDDDETEGTRDSENQSE
ESAPELDNVSSEPATKEDGNNISVANNISDDSENRSEEAAPELDKVSSEPANMEDRNSIS
VVHNVAHDDNREETVPERDEVSYVNTEKSVETKGSKLSALAEPFNPGALYIAVTSVYDVT
ACQAMLAEPVIEPAVAARVRCGPMFPLYHGNNHSYNMKQGFPRYQTLEQTEFRPPRVMNP
HAPEFVPTTEPATTEAKALHVNEGHDVASQSSTCEQPKTSDVNIKKTRDGEGFTVVTKRR
RKRHQFMNGVSNGPYNHHHQSICA
NT seq
4935 nt
NT seq
+upstream
nt +downstream
nt
atggccccaaaatcaagcagcaaaagcaaatcaaacaaagctaaaccagagaagaagaac
aagaaaaaggaggagaaagttgttcctagtgttcttgatatcactgtcattactccatat
gaatcccaagttatactgaagggtatttcaactgataagatagttgatgtaaaaaggcta
ttggcttctcatgttgaaacatgccattttacaaactattctttaactcatgaggtcaaa
gggaagagattgaatgagaaagtagaagtggcaactttgaaaccatgtttgctcaaaatg
gttgaagaggattataccaatgaagagcaggcggtggctcacgtgcggagactcctagat
attgtagcgtgcaccaccaggttctccaagcctaaacgagtacgatcacaatcatcatcg
tccgattcaaaatctaaaaaggttaacggcgggccccaccatcgtcctcgagagccgtcc
gatggaggacctggaacggcgtggattatggagagcatggagatggctgccattcagcct
accccaaaattatcggaattttatgatttcttttccttctctcacctcgctccgcccatt
ctcaatttgaggaaatgtgagcccaaggatgtagaagggaggcatgaaggtgactatttc
ataatgcagataaaaatctgcaatgggaagcaaatacaggtagttgcatcagtaaaaggg
ttttatactgtgggaaagcattttttcctgagccactgtttgttagatcttttgcaaaat
ctaagccaagcctttgctgatgcatatgaatcccttatgaaagctttcatagaacacaat
aagttcggcaatcttccatatggatttcgtgcaaatacatggcttgttcctccccttgtt
gccaactctccatcgaccttcctttcttttccattggaagatgagcaatggggtggtaat
ggtggaggccagggaagaaatggtgaatatgatcttcaaccgtgggctacggattttgca
atattggctaaccttgcttgcaaaaccgaagaggagagggtagttcgtgatcgcaaggcc
tttttgcttcgtagtcgatttgttgatgtctcgatctttaaagctgttgcaacaatacag
catgttatgaataacaggtcaattgtgaaaggcactgtaaatagccatcctgactcagtt
cttcatgaggaccgtataggtgacttgtccattacggtaaaacaagaatcagcggatgta
aaggttgctggtcatcattcatttggcatgactgctaatgaaattgctcaaaggaattta
cttaaagggatatctgcagacgagagtgcggtttttcatgatatttcctcgatgggcact
gtcattgttagacattgtggctacattgcaatcgtaaaggttgttggtgaagtgaagaac
gaactgcacagtgctcgggatattgacattgatgatcaaccagacggaggagctaatgct
cttaacattaacagcttaagggttttacttcacaagtcaggcgctaaagaatcgagtgga
ggccaatcacatcaactcaactcgaatgattccgaaccttctagatgccttgttcggcaa
gtagttaaagagagcttgaccaaactagaggagaactcggttgttcctgaaaggtctatt
agattagaactcggttcttgttggttgcaatgtctacagaaacaggaaactttgagagat
actacttcaaacggacttggtcgtgatcatgaggctgaaccggctgtgaaaggtcttgga
aagcattttaaatgcttaaagaaaagggataaaaaaccaagtaacagcggtagcaaagtt
gacgaggaagaaaatgattgcgagccatgtggtatgaatcaaagcattggtgagtccaga
aatcagatggaactgaagaaccttatttccgaagaagctttctcacggcttgaagaaagt
cgaaccggtcttcacttaaagtcagtcaatgagcttattaagatggcgtatgagtactat
gatgacactgccttaccaaagctggtaacagactttggatcacttgaactttcacccacc
gatggtcgttccctgactgactttatgcatctaaggggactaaaaatgcggtctttgggt
cgtgtggttgaacttgctgagaagctgcctcacatacaatcactttgcatccatgagatg
gttactcgagctttcaaacacgtactcaaagcagtcgttgcatctgttgacaaattcgag
gacttacctgcagctatagcttcatccctaaatttcttactcggaaataatggatcagaa
gataatgctgaaaacgcaaatgatgactatttgctaaaattgcggtggttaagaaagttt
ctttctgcaaaatttggttggaaactacaagatgaattccggcatttgagaaaactatcc
attcttcgagaactttgccataaggttggtctagagttggttcctaaagactatgacatg
gaatgcaaagaacctttcgaaagttgcaatattattagcatttatcctgtttgtaagcat
gtagtatgcgcttctgccgatggccgaacattgttagagtcatccaaggcggctcttgac
aaaggaaaactagaggatgcggttaattatgggacaaaggcattagcaaagatgatagct
gtatgtggtccttaccatcgaactactgcgagtgcttacagtcttcttgctgtggttctc
taccatactggtgatttcaatcaggcaattatatatcaacagaaagctttggatattaat
gagagggagctcggtcttgatcatccagacacggtgaaaagctatggggatcttgctgta
tattattatcagcttcaacactttgaaatggctttgaaatatgtaaaccgttctttattc
cttctccattttacttgcggattgtctcacccaaataccgccgcaacatatataaatgtg
gctatgatggaagaaggcatgggaaatgttcacgtggctctcagatatttgcatgaagct
ctaaagtgcaaccagagactactaggagcggatcacatacagacggctgcaagctatcat
gccattgccattgctctttcattgatggaggcatattctttaagcgtgcaacatgaacaa
actacattcaaaatacttcaagcaaaactcggacaagatgaccttcgtacacaggactcc
gctgcttggatcgaatactttgaatcaaaagctttagaacagcaagaagctgcacgaaat
ggaactccaaagccagatgcttccattgcaagcaagggtcatcttagtgtgtccgacctg
ctcgattacattagtcccgatcaagattctaaaggaactgatgtacagaagaagctgctg
cgtgccaaggtgttacagactagtgacaaaacccatgacgcatgtcacaactttgtaaca
gacagttctgtgttcaatggtgtctcagagaaaagtatcagtactgcagatattaatgaa
agaagaatggtgagttctatttgtcttgaagagccaaagaaaactaatgatgttactaga
gttgagccaatggttacaagtgaagttttcgaagagacaacttcggatgaagggtggcaa
gaagccaattcaaaaggacggtcaggaaatgccgtcggaaggaagtctcgaaggaagaga
actgcccttgcaaatgttagagtgagtggctctaggcgagaaactatttttccggtgaga
aaaacttcctctaagaacattgtaaaggaggtagttccggtgaagcaattgatgtcccat
aactcaaaccccggagggaattcggttagtttacgagcttctgtttccaaaggttccttg
tcttcagcaaatctcagtgccgttgcttcgaaatgtctttcttacaaagaagtagctgta
gcacctccaggtacagttctgaagccattacatgagggggaaaccgaacatcaggtgtgc
accatccgaactgagactacaaaatcggaggatggagaccatatgtctgttattgataac
gttgtagataatgatgatgatgaaactgaaggaactcgtgatagcgaaaatcaatcagaa
gaatctgctcctgaacttgataacgtttcttccgagcctgcaaccaaggaggatggaaac
aatatctctgttgctaataacatttcagatgatagtgaaaatcgatcagaagaagctgct
cctgaactcgataaggtttcttctgagcctgcaaacatggaggacagaaacagtatctct
gttgttcataatgttgcacatgatgacaatcgtgaagaaacggttcctgaacgtgatgag
gtttcgtatgtaaatactgaaaagtctgtagaaacaaagggaagtaagctatcagcatta
gcggaaccgttcaatcctggagcactctacattgctgttacaagtgtttatgatgtaaca
gcctgtcaagctatgcttgccgagcctgttattgaacctgcagttgcagctcgagttcgt
tgcggaccgatgttcccattatatcacggaaacaaccattcttacaacatgaaacaaggc
tttccgagataccaaaccctcgaacaaaccgagttccgacctccgcgagttatgaaccct
catgcacccgagtttgtacctacaactgagccagcaacaacagaagcaaaagctctccat
gtgaatgaaggacatgacgtggcatctcaatccagcacctgcgaacaaccaaaaacatca
gatgtaaatataaagaaaacccgggacggcgaaggatttacggttgtaacgaagcgaaga
aggaagaggcatcagtttatgaatggagtaagtaatggaccatacaatcatcatcatcaa
tcaatatgtgcttag
DBGET
integrated database retrieval system
