Gossypium raimondii: 105773123
Help
Entry
105773123 CDS
T04129
Name
(RefSeq) pentatricopeptide repeat-containing protein At2g15820, chloroplastic
KO
K27936
pentatricopeptide repeat-containing protein, chloroplastic
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gra03041
]
105773123
Spliceosome [BR:
gra03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
105773123
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LAGLIDADG_2
PPR_2
PPR
PPR_long
PPR_1
ARM_TT21_N
AEP1
Motif
Other DBs
NCBI-GeneID:
105773123
NCBI-ProteinID:
XP_012450253
UniProt:
A0A0D2M518
LinkDB
All DBs
Position
1:436365..439615
Genome browser
AA seq
835 aa
AA seq
DB search
MDVQQMIVAANKAQCFVSPPLSTLIITINTPSLNPNTPAKTPMRTSLSFLRLFRPLSRPQ
TVLFRPLIPRYAAPRFSPSFSRHFSVSSAPFSASAVGFVEKEREEEERWDFSDNETEAKL
VFEDNDGVFADNDMKHLVAPEIEVKELDELPEQWRRSKLAWLCKELPAHKAGTLVRILNA
QRKWLKQEDATYLAVHCMRIRENETGFRVYKWMMQQHWYRFDFALATKLADYMGKERKFT
KCREIFDDIINQGRVPSESTFHILIVAYLSTPVQGCLDEACGIYNRMIQLGGYQPRLSLH
NSLFRALLNRPGGSSKYYLKQAEFIFHNLETCGLEMQKEIYTGLIWLHSYQDTVDKERIK
LLRKMMRESGMEEGKEVLISILRACSKDGDVEEAERTWIKLLGSNDSIPSQAFVYKMEVY
SKVGEITKSLEVFREMKKCLGYTSIASYHKIIEVLCESEQMDLAESFMKELIESGMKPLM
PSYIKLTDTYLRLNYHDKLESTFLECLEKCRPNRTIYSIYLSSLVKVGNLGKAEEIFNHM
GENVTIGVNAKSCNTILYGYLSSGDNSKAEKIYDLMCQKKFEIESPLMEKLESVLRSSRK
EVKKPVSLKLSKEQREILMGLLLGGLRIDSDEERKNHMIRFEFNPSSIPHSILKRHIHDQ
YHEWLHPSSKLTAGNGDIPHKFNTISHSYFGFYADQFWPKGQPVIPKLIHRWLSPIVLAY
WYMYGGYRTSAGDILLKLKGSSEGVKKVVKTLKSKSLNCRVKRKGRVFWIGFLRTDSMWF
WKLVEPYVLDELKDFLKAGSETADDCAVKSRDINFDSASDSDEKGSSDYSEDDNP
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgcagcaaatgatagtagcagcaaacaaagctcaatgcttcgtttccccgcct
ctttcaaccctcataatcaccatcaataccccttctttaaaccctaatacacccgccaaa
acccccatgcgcacttccctctctttcctccgcctcttccgccctctttcccgccctcaa
accgtccttttccgccccctcatccctcgctacgccgcgcctcggttttccccttctttt
tcccgccacttcagtgtatcttccgccccattctcagcctccgccgttggtttcgttgaa
aaggaaagggaagaagaagagaggtgggatttctccgacaacgaaaccgaagcgaaactc
gttttcgaagacaatgatggggttttcgcggataacgatatgaagcacttggtggcaccg
gagatcgaggttaaggaactagacgagttgccggagcagtggcgaaggtcaaagctcgct
tggctttgcaaagagttgccggctcataaggcgggaaccttggttaggatcttgaatgcg
caaaggaagtggctcaagcaagaggatgctacttacttggctgttcattgtatgagaatt
cgagaaaatgaaactggtttcagggtctataagtggatgatgcagcagcattggtatcga
ttcgattttgctcttgctaccaagctagcagattacatggggaaggagaggaagtttacg
aaatgtcgggagatattcgatgatatcatcaaccagggacgtgtgcctagtgagtctacg
tttcatattctgattgttgcatatcttagtacaccggttcaaggttgtttagacgaggct
tgcggtatttacaatcgtatgattcagttaggaggataccaaccacgtcttagcttacat
aactcgcttttccgagctcttttaaacagaccgggaggttcttcgaaatattacttaaag
caagccgagtttatctttcacaatttagaaacatgtggtttagagatgcaaaaagaaatc
tatactggcctaatttggttgcatagctatcaagatacagtggataaagaaaggataaaa
ttgttgaggaaaatgatgcgagaatcgggtatggaagaaggaaaagaagtgctcatttcg
atattgagagcttgttcgaaggatggggatgttgaagaagccgaaagaacttggatcaaa
ctactcggttccaatgatagtatcccttctcaagcttttgtttataaaatggaagtttat
tcaaaggttggggaaattacgaaatctttggaggtattccgggagatgaaaaagtgtttg
gggtatactagcatcgcatcataccacaaaattatagaggtattatgtgaatccgagcaa
atggaccttgctgaatcgttcatgaaggaactcattgagagtggtatgaagccacttatg
ccatcgtacatcaagctaacagatacatacctccggttgaactatcacgataagctcgag
tcgacctttttagagtgccttgagaaatgccgaccgaatcgtactatttatagtatatac
ttgagctcgttggtgaaagttgggaatctcggcaaagcagaggaaattttcaatcacatg
ggcgagaatgtcacaattggtgttaatgcgaaatcatgcaataccattttatatggatac
ctttcttccggagataattcgaaagcagaaaagatatatgatttgatgtgccagaagaaa
ttcgaaatcgaatctccgttgatggaaaagttggaaagtgtccttagatcgagccggaaa
gaggttaagaaacccgtgagtttaaagctaagcaaagaacaacgagagattttaatgggg
ttgcttttaggcggtttacggatagactcggatgaagagagaaagaaccacatgatacgg
ttcgagtttaatccaagttccatcccacattctattttaaagagacatattcacgatcaa
taccacgagtggttacatccttcgagtaagctaactgctggtaatggtgatatcccgcac
aagttcaataccatttcacactcgtatttcggtttctatgcggaccagttttggccaaag
ggtcaacctgtgatcccaaagctaatacaccggtggctgtctccgattgtacttgcatac
tggtatatgtacgggggctacagaacatcagccggggatatccttttgaaactgaaaggg
agcagcgaaggcgtcaagaaagtggtgaaaacgttgaaatcaaaatccttgaattgccga
gtgaagcgaaaagggagagtgttttggatcggatttctcaggacagattcaatgtggttc
tggaaactggtggaaccatacgtcttagatgagttgaaagattttctcaaagcaggcagc
gaaaccgcagatgattgtgcggtcaaatctcgagacataaactttgacagtgcatccgat
tccgatgaaaagggttcttccgattatagcgaagatgataatccataa
DBGET
integrated database retrieval system
