Gossypium raimondii: 105773189
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Entry
105773189 CDS
T04129
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 16
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gra01002
]
105773189
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gra04121
]
105773189
Enzymes [BR:
gra01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
105773189
Peptidases and inhibitors [BR:
gra01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
105773189
Ubiquitin system [BR:
gra04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
105773189
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
Motif
Other DBs
NCBI-GeneID:
105773189
NCBI-ProteinID:
XP_012450348
UniProt:
A0A0D2U8C9
LinkDB
All DBs
Position
6:complement(3294126..3301136)
Genome browser
AA seq
1069 aa
AA seq
DB search
MLLIGDLGFSSLVLVVSIIIPLFGFFIRRKWRLSIARQAEIKRLMILASEEAARAELEAS
IGYGSVPVSRNYHQCAVCYCPTTTRCARCKAVRYCSTQCQVIHWRQGHKEECYPAAVAKH
QNHDEGSDCDSGQKVTEQHQIGDGFESKEKQHAEPTKSSSKESGLHNSTTEPALSSSTSC
SAVLLEKDDDIKVEFQADGEGRSIASESSSTSFSGFSSSVTGSESSDDVSVCESVGSNEP
CRLEISSSADDSKLDTLWTASGVSNVDQTKLSSPKFASLVDSVDKFSKLNASNQMKPDQG
GEIQCRASGSSSVISDMSEGSTSEVRTLSSGFWGRTLEPVVSTNDANDEAFQSNPKEGGE
SASLDPGSSLHFSFSLSQNASSLPPQGLKVKAAKLDDAPRSASGYTQLSNGVTLPENVDL
DAPNVSRSSSSNSECANHVECGSTNVSPISKPREAINRDVPLVSSLSSSCSEKSDSSSVI
NGPSASHLLKSSDAYSSSARLHAVPNAKSGNFGGVHANAATLPKVSSSSDSTHGLKTSMR
KIADQFRGSKLPKHYPLGVGNEDSGNYNKVLFPYESFVKLYSGSKANLQPCGLVNCGNSC
YANAILQCLTFTPPLTAYFLQGLHSKACAKKEWCFTCDLENLILKAKEGKSPLSPKGILS
QLQNICGQLVQGKEEDAHEFLRYVIDVMQFDCLKEAGVRSSGCSEEETTLIGLTFGGFLR
SKIMCVKCQGKSERHERMMDLTVEIEGDIETLEEALHRFTRTEILDGENKYQCGRCNSYE
KAKKKLTISEAPNVLTIALKRFQSGKFGKLNKAIQFPEILNLAPYTSGTSDNSPIYRLYG
VVVHLDIMNAAFSGHYVCYVKNAQNKWFKIDDSKVTSSELGNVLTKGAYMLFYARCSPRA
PRSIRSRSKSILSKINSKNYPKSSSTHPDNSGSIESFYSKYNRLQKILEEDSSSDTSSLF
GSNSDNTSSCTDSTQDDSLDSVFGDSDASSSPSSSPLYSKHSPLADLDRYDSGSPEIDPL
FHSNTSKQCRDVGSYSNSSSSRETDSELLGRVNSLNEVYFRKSLKKRTN
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atgcttcttattggggatctagggttttcgagcctggtccttgtggtttccatcattatt
cctttgttcggctttttcattaggcggaaatggaggttatcaatagccaggcaagcggag
atcaagaggcttatgattttagcgtcggaagaggctgctagggctgagcttgaggcatca
attggatacggtagtgttccggtttcgcgtaactatcatcaatgtgcagtttgctattgc
cctactactacacggtgtgctcgctgcaaagctgtccggtattgttctactcagtgtcaa
gttattcactggcgacaaggtcacaaggaagaatgttatccggctgcagttgccaaacac
caaaatcatgatgagggaagtgattgtgattctggtcagaaggtgacggagcaacaccaa
attggagacggatttgaatctaaagaaaagcagcatgcagagccaactaaatcatcctcc
aaagaatctgggttacataattccaccactgaacctgcactgtctagttctactagctgt
tctgcagttttacttgagaaggatgatgatattaaggttgagttccaggctgatggggaa
ggaaggagcattgcttcagaatcttccagtacttcattttctgggttttcttcttctgta
actggtagtgaatcgtctgatgatgtttctgtgtgtgagagtgttggttcaaatgagcct
tgtagacttgagatatcttcatctgctgatgattctaaacttgacacgttgtggactgct
tctggtgtcagcaacgtggatcaaaccaaattgtcatccccaaaatttgccagcttggtt
gattctgtggataaattttctaaattaaatgcatcaaatcagatgaagcctgatcaaggt
ggagagatccaatgcagagcaagtggcagttcttcagttattagtgatatgtctgagggc
tcaacttctgaggttcgtactttatcttctggtttctggggcagaactctggaaccagtt
gtatctacgaatgatgctaatgatgaggcttttcagtcaaatcctaaagaaggcggtgaa
agtgcctcacttgatcctggatcttccttacatttttcattcagtttgtctcaaaatgct
tcttccttgcctccacaaggcttgaaggttaaagctgccaaattggatgatgctcctcgg
agtgcttcggggtacacccagctttctaatggagtaactttgccagaaaatgttgatttg
gatgctccaaatgtcagcagatcctcatcctcaaattctgaatgtgctaaccatgtggag
tgcgggtctaccaatgtttcacctatctcaaaacccagagaagctatcaatagagatgtt
ccgttagtcagtagcttgtcatcgtcatgttctgaaaagtcagattctagttctgttatt
aatggacctagcgcttctcatctattaaagtcttctgatgcttattcatctagtgccaga
ttgcatgcggttcctaatgctaaatctggaaattttggtggtgttcatgccaatgctgct
acgttacctaaggtttcaagttcttctgatagcactcatggattgaaaacctccatgcgg
aaaattgctgatcaattcagaggatctaagttgcccaaacactatcctttaggagttggt
aatgaggattctggaaattataataaggtactttttccttacgaatcttttgtcaagctt
tacagtgggagcaaggcgaatctgcaaccatgtggccttgtaaactgtgggaacagctgt
tatgccaatgctattctccaatgcttgacattcactcctcccttgactgcttactttctt
cagggactccattcaaaagcatgtgcaaagaaagaatggtgtttcacctgtgatttagaa
aatttaattttgaaggccaaggagggaaaatctccactgtcccctaaagggatactgtct
caactacaaaatatttgtggccaacttgttcaagggaaggaggaggatgcacatgaattt
ttaaggtatgttattgatgtgatgcaatttgattgtcttaaagaagctggggtgcgttca
tcagggtgttctgaagaagaaacgactttaataggcctaacatttggaggttttctccgg
tcgaagataatgtgtgtgaaatgtcaaggcaagtctgaacgtcatgaaagaatgatggat
cttacggttgagattgaaggagacatagaaaccctggaagaggctcttcatcgctttacg
aggactgagattttagatggagaaaataagtaccaatgtggcagatgcaactcttacgag
aaggccaaaaagaagttgacaatatcagaggctccaaatgtcctcacaattgctttgaag
cgatttcagtctggtaaatttgggaagcttaacaaagcgattcaattccctgagatcttg
aacttggcgccgtatacgagtgggacaagcgacaattcacccatttacaggctctatggt
gtggtggttcacttggatattatgaatgctgcattttcaggtcactatgtctgttacgtt
aaaaatgcccaaaacaagtggttcaagattgatgatagcaaggtaacatcctctgaactt
ggtaatgttctaacaaaaggcgcatacatgcttttttacgcaaggtgctcacctagagcc
ccaagatcgataaggagcagaagtaagtccattctatcaaaaataaattcaaagaattat
ccaaagtcaagttcaactcatcctgataattcagggagtatcgaatccttttattcgaaa
tacaatcggttacaaaagattttagaagaggattcatcaagtgatacttcttctcttttt
ggcagcaattctgataatacttcttcctgtactgatagcacacaagatgactcactggat
tctgtatttggcgattccgatgcttcatcttccccttcctcttctcctctttactcaaag
cattcacccttagctgatttagaccgatacgattcaggttcgcctgaaattgatcctctt
ttccactccaacacgagtaaacaatgtagagacgtaggtagttatagtaatagtagtagc
tctagggaaactgactcagagttattaggacgagttaactcattaaatgaggtatacttt
agaaaatcattgaagaaaagaacaaattaa
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integrated database retrieval system
