Gossypium raimondii: 105773294
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Entry
105773294 CDS
T04129
Name
(RefSeq) uncharacterized protein LOC105773294 isoform X1
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
gra
Gossypium raimondii
Pathway
gra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105773294
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gra03041
]
105773294
Spliceosome [BR:
gra03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
105773294
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Motif
Pfam:
UCH
zf-UBP
zf-UBP_var
Pox_G5
YonK
Motif
Other DBs
NCBI-GeneID:
105773294
NCBI-ProteinID:
XP_012450502
UniProt:
A0A0D2UKL1
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Position
6:complement(60098988..60103012)
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AA seq
551 aa
AA seq
DB search
MRRSRKDGDSVDEERDSRRRRIVDSPSSPAEEPLVPYNDDEDDERRVLDHSGGAEEVGRR
VETEEEDDDDDDDDDPYGRGSILDKSNRQVEVRRDCPYLDTVNRQVLDFDFERFCSVSLS
NLNVYACLVCGKYYQGRGKKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLDDI
RYVLNPRFSREQVEQLDKNKQWSRALDGSDYLPGMVGLNNIQKTDFVNVTIQSLMRVTPL
RNFFLIPENYQHCRSQLVHRFGELTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQ
SEPVEFMSWLLNTLHADLRISKKSSSIIHKCFQGELEVVKETQNKAISERKEGGGEHNGA
LKIMDGATENNNIGTETYRMPFLMLGLDLPEPPLFKDVMEKNIIPQVPLFNILKKFDGET
VTTTVRPPARMRYRVTRLPQYLIVRMSRFTKNNFFREKNPTLVNFPVKNLELKDYIPLPA
PTKENEKLRSKYDLIANIVHDGKPDEGFYRVFVQRKSEELWYEMQDLHVSETLPQMVALS
EAYMQIYEQQQ
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgagaagaagcaggaaagatggtgatagcgtagatgaggaacgagactcaagacggcgg
aggattgtggattctccttcttcacctgctgaagaaccgcttgtgccttacaatgatgat
gaagatgatgaaaggagggtattggatcacagtggtggggcagaagaagttggccgaagg
gttgaaactgaagaagaagatgatgatgatgacgatgacgatgatccatatgggagagga
tcaattttagacaaatcaaatcgccaggttgaagtacgaagagactgcccttaccttgat
actgttaaccgacaggtgctagattttgattttgagaggttttgttcggtctctttgtca
aatttgaatgtgtatgcatgtctggtatgtgggaagtattaccaaggaagagggaagaag
tcccatgcttacactcatagtctcgaagcaggacatcatgtctatatcaatcttcgaact
gagaaggtgtattgtctccctgatggatatgaaattaatgacccgtcattagatgatata
cgatatgttctaaacccaaggttttccagagaacaagttgaacaacttgacaagaacaag
caatggtctagagcacttgacggttcagattaccttccaggaatggtgggattgaataat
attcaaaaaactgattttgtcaatgtcaccattcaatctttaatgagagttactcccttg
aggaactttttcctcatccctgaaaattaccagcactgtagatctcagcttgttcatcga
tttggggagctcacacgaaagatttggcatgctcgaaactttaaaggacaggtgagccct
cacgagtttctacaggccgttatgaaagccagtaaaaaacggtttcgaataggtgtgcag
tctgagccagtagagtttatgtcatggcttcttaatacactgcatgcagatcttagaatt
tcaaagaaaagtagcagcatcatccataagtgctttcagggggaactggaggttgtaaaa
gagacgcagaacaaagctattagtgagagaaaagaaggtggtggggaacacaatggagct
ctgaagattatggatggtgcaactgagaataataatattggtaccgaaacttacagaatg
ccttttctgatgcttggattggatttgccagaaccacctcttttcaaagatgtgatggag
aaaaatataatacctcaggttcctttgttcaatatattgaagaagtttgatggtgagact
gtaacgaccactgttcgtcctccagcgaggatgagataccgtgtcaccagattgccacag
tacttgatagttcgcatgagccgctttactaagaataatttcttcagagaaaagaatcca
acattggttaactttcctgtgaaaaacctagagttgaaggactacattcctctgccagca
ccgaccaaagagaatgaaaagttgcggtccaagtatgatctgattgctaatattgttcat
gatggtaagcctgatgaggggttctacagggtcttcgtacagcggaaatcagaagaacta
tggtatgaaatgcaggatctgcatgtttctgaaacacttcctcagatggttgcattgtct
gaagcttacatgcagatatacgaacagcaacagtag
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