Gossypium raimondii: 105773392
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Entry
105773392 CDS
T04129
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
gra
Gossypium raimondii
Pathway
gra03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105773392
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gra03021
]
105773392
03036 Chromosome and associated proteins [BR:
gra03036
]
105773392
Transcription machinery [BR:
gra03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
105773392
Coactivators
SAGA/TFTC/STAGA complex
105773392
Chromosome and associated proteins [BR:
gra03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
105773392
STAGA complex
105773392
TFTC complex
105773392
SAGA complex
105773392
SLIK complex
105773392
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_IFT122_1st
TFIID_NTD2
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML_2
WDR55
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
DSE1_N
Beta-prop_EML
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_VPS8
Beta-prop_Aladin
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
CFAP251_N
Beta-prop_SCAP
ASA1
Beta-prop_WDR19_1st
PAC11
Beta-prop_WDR41
Beta-prop_NOL10_N
Beta-prop_DCAF4
Beta-prop_EIPR1
Ge1_WD40
Beta-prop_Vps41
Beta-prop_SPT8
Tricorn_2nd
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
WD_LRWD1
Rab5-bind
Beta-prop_ACSF4
PALB2_WD40
PPR_2
Cytochrom_D1
Beta-prop_EDC4L
LisH
KAT3
Motif
Other DBs
NCBI-GeneID:
105773392
NCBI-ProteinID:
XP_012450728
UniProt:
A0A0D2N571
LinkDB
All DBs
Position
7:50038750..50044735
Genome browser
AA seq
668 aa
AA seq
DB search
MENMQAVNSFVTAYLKKKGFKEAEQLLEDLQKKESAPIDFHNDPDLAKLIHHFSQSEDDV
ARYQDGYSKLRSWTYSSLDLYKHELLRVLYPVFIHSFMDLVAKGHLQEARTFFNAFHEDH
ELMHSRDLQKLEGVLSQSHLEEMEFARSLRQNKVNIKICQYSYGLLLQYLHKTQSTAMLG
VINEHINFQVTSGQPGSISDDTEVVTLIGSCQDAASLINQKEIHWGLLEDSLEERLEKEG
GLLSDSEKAEAENKEGDVDDSKKRSVEGGKQGASTKKLKKDKAVNATAKSARPEAKPTPA
APRVKPELTLPVMSTEVEQSILEDLRNRVQLSSIALPSVSFYTFLNTHNGLNCSSVSQDG
SLVAGGFSDSSLKVWDMAKLGQQAGSSTLQGENDSTSSEHVAGPNGVKRSYTLFQGHSGP
VYSATFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFSPVGHYFASSSH
DRTARIWSMDRIQPLRIMAGHLSDVDCVQWHANCNYIATGSSDRTVRLWDVQSGECVRIF
IGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLSSGRCVTPLMGHTSCVWSLAFSCEGTV
LASGSADCTVKLWDVTTSTKAPKNEEKSGNPNRLRSLKTLATKSSPVYSLRFSRRNLLFA
AGVLSKKY
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatatgcaggctgtgaatagcttcgtgacagcttatttgaagaagaaaggattc
aaagaagcggagcaattgttggaggatcttcagaagaaggagtccgctccaatcgatttc
cacaacgaccctgatcttgctaagttaattcatcacttttcccagtcagaggatgatgtg
gcacggtaccaggatgggtatagcaaactgaggtcgtggacttatagttccctagattta
tacaagcatgagttgcttcgcgtgctttatccagtctttatacattcattcatggatctg
gtggcgaaaggacatttgcaagaggctagaaccttttttaatgcctttcacgaggaccat
gaactgatgcactcacgggaccttcaaaagttggaaggcgttctttcgcagtctcatttg
gaggagatggagtttgctcgttctcttaggcagaataaagttaacatcaagatatgtcag
tattcatatggccttctgctgcaatatttgcataaaacacagtccactgctatgctgggg
gtcatcaatgaacatatcaatttccaagttacttctggacagcctggttcgatttctgat
gatacagaggttgtaacactaattggaagctgccaggatgcagctagtctgataaatcag
aaagaaatacattggggattactagaagactccttagaagaacgtttggagaaggaagga
ggtttgctttcagattctgaaaaggcagaagcagagaacaaagaaggggatgtagatgac
agtaagaaaagatcagtagaaggtggaaagcaaggtgcttcaacaaaaaagttgaaaaag
gacaaagctgttaatgcgacagcaaaaagtgctcgccctgaggctaaacccacccctgct
gcaccacgagtcaagccagagctcactttgcccgtaatgtctacagaggtagaacagtct
atacttgaggacttaagaaaccgtgtacagttgagtagcattgcattgccatctgtcagc
ttttatacgttcctcaacacgcataatggtttgaactgttcatcagtatcccaggatgga
tctttggttgctggagggttctcagactcatcactgaaggtttgggatatggcaaagctg
ggccaacaagctggtagttctactttgcagggtgaaaatgattctacttcaagtgaacat
gttgcgggaccaaatggtgtgaaaagatcctatacattgtttcagggtcattcaggacca
gtttattcagccacctttagtcctcttggtgattttattctttcctcttcagcagataca
acaattcgcttgtggagcacaaaactaaatgcaaatcttgtttgctacaagggtcataat
tatcctgtatgggatgttcagtttagtcctgtaggacactattttgccagctcttcacat
gatcgaacagcaaggatttggtcaatggatagaatacaacctttgagaataatggcagga
cacttgtctgatgttgattgcgtgcaatggcatgccaactgcaactatattgccacaggc
tctagtgacagaacagtaagattgtgggatgtacaaagtggagaatgtgttcggattttc
attggtcataggagtatgatattgtcactagcaatgtcacctgacggccgctatatggct
tctggtgatgaagatggcacaatcatgatgtgggacctttcaagtggacggtgtgttacg
cctttgatgggtcacacctcttgcgtatggtcacttgctttcagttgtgaaggtacggtt
ctagcatctggatcagctgattgcactgtaaaattgtgggatgtcacaacaagcacaaag
gccccgaaaaacgaagaaaagagtggaaatcccaacagactgagatcgttgaaaaccttg
gcaaccaagtctagtccagtgtatagtttgcggttttcgaggaggaatctgctgtttgcg
gctggggtgctctctaagaaatattaa
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