Gossypium raimondii: 105773447
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Entry
105773447 CDS
T04129
Name
(RefSeq) protein RDM16 isoform X1
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
gra
Gossypium raimondii
Pathway
gra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105773447
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gra03041
]
105773447
Spliceosome [BR:
gra03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
105773447
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
Motif
Other DBs
NCBI-GeneID:
105773447
NCBI-ProteinID:
XP_012450822
UniProt:
A0A0D2RB05
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Position
6:55078295..55083137
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AA seq
762 aa
AA seq
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MDKDKHATKRSRDRDGRHHRDSDHHHDSRDSHRRSDHRSSTSRRDERERSFEREGSRDRR
HREGSYEEVEAKRKRKEREESEERGEKRSKLGEENRREKRERRRFGDKAKEDDEIEFSNG
ANGGDPVQNGAAQASLPKTGHPLPTKVSSISTAENKAYSVTGSHEVTGSSTDGSSSTGKS
GANLSLDALAKAKKALQMQKELAEKLKKIPSLNKGPSSSSVVTTGAVQRPVSTVATSVAT
GPSSSSVPPASAAVASVKPPTTGMPAVPGLESIPNLEAVKRAQELAAKMGFRQDPQFAPL
INLFPGQVQVDVPVAQKPTKAPLLRVDALGREIDEHGNIINVTKPSNLSTLKVNINKQKK
DAFQILKPELEVDPESNPHFDARMGIDKNKLLRPKRMTFQFVEEGKWSKDAEVIKLKSQF
GEAKAKELKAKQAQLAKAKADINPNLIEVSERIITKEKPKDPIPEIEWWDLPILVSGSYD
DIPDGVLCEDKLKKEKITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLARE
KDKQEMIRQGLIEPPKPKVKLSNLMKVLGSEATQDPTKLEMEIRSAAAEREQAHVDRNIA
RKLTPAERREKKERKLFDDPNTVETIVSVYRINDLSDPKTRFKVDVNAQENRLTGCAVIS
EGITVVVVEGGSKSIKRYGKLMLRRINWAEAVKDDKDGDEDEDEEKPPNKCVLVWQGSVA
KSSFNRFSVHECITEAAAKKVFADARVAHYWDLAVNFSENDF
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atggacaaagataaacacgcaaccaaacgctcccgagaccgcgacggccggcatcaccgt
gactccgatcaccaccacgacagccgcgattcccaccggcgatcggatcatagatcttcc
acatcgcgccgtgacgagcgcgagagatcttttgagagggaaggatcgagagataggagg
catcgcgagggttcctatgaagaagttgaagcgaagaggaagaggaaagagagggaagag
agtgaggagaggggggagaagaggagtaaacttggagaagaaaatagaagagaaaagaga
gagaggaggagatttggggataaggctaaagaagatgatgaaattgagttctccaatggc
gccaatggtggtgatccagttcaaaatggtgctgctcaggcatcattaccgaagactggt
cacccccttcctaccaaggtatcttcgatttctactgctgaaaataaagcatatagtgtt
accggatctcatgaggttactggatctagtacagatggctcttcttctactgggaaaagt
ggtgcaaacctctctcttgatgccttagccaaagcgaaaaaggctttacaaatgcagaaa
gaattagctgagaaactgaagaagataccctcattgaacaaaggccctagctcgagttca
gtagtgactactggagcagttcaacgaccagtctcaactgtggctacatctgttgccact
ggaccatcaagctcatcagttccccctgcctctgcagcagtagcttctgtgaagccacct
actactggcatgcctgctgttccgggccttgagtcaatacccaatttagaagctgttaaa
cgtgctcaagagctggctgctaagatgggattccgccaggaccctcagtttgctcctcta
ataaacttgtttcccggacaggtgcaagtagatgttccagttgcgcagaaacctacgaag
gcacctcttctccgtgttgatgcactcggtagagaaattgatgagcacggtaatatcata
aatgtgactaaaccaagtaatcttagcaccctcaaggtcaacattaacaagcaaaagaaa
gatgcattccagatccttaaacctgaactggaggtggatccagaatcaaatccacatttt
gatgcacggatgggaatcgataagaacaagcttcttagaccaaaaaggatgacttttcag
tttgtagaggaagggaaatggtcaaaagatgcagaggtcatcaaattgaagagtcaattt
ggagaagcaaaagcgaaagagctaaaagcaaagcaagcacaattggcaaaggcaaaggct
gatataaatccaaatttaattgaggtgtcggaaagaattataacaaaggagaaaccaaaa
gacccaattcctgaaatagagtggtgggatttacctattctggtttcgggttcctacgat
gatatccctgatggtgtgctttgtgaagataaactgaagaaggagaaaatcacaatatat
gttgaacatcctcgtccgattgagcctcctgctgagccagctcccccaccacctcagccc
ctgaagctaaccaagaaggagcagaagaaacttcggactcagcgacgtctggcccgggag
aaggataaacaggagatgattagacaaggcttgatagaacctccaaagccaaaagttaag
ttgagcaatttaatgaaagttttaggctccgaagctacccaagatcctactaagcttgaa
atggaaatccgaagtgctgctgctgagcgggagcaagctcatgtcgacaggaacattgct
cgcaagcttactcctgctgagcgccgtgaaaagaaagagagaaagctttttgatgatcca
aatacggtggagactattgtttcggtttacaggatcaatgacctctctgatcccaagacc
cgcttcaaagtcgatgttaatgcccaagaaaaccggttgactggttgtgctgtgatttcc
gagggcattactgttgtagtagtggaaggtggaagcaaatccattaagaggtatgggaag
cttatgcttcggcgaatcaactgggctgaagctgtaaaagatgacaaggacggagatgaa
gatgaagacgaagagaaaccacctaacaagtgtgtgctggtttggcaaggtagcgttgcg
aaatcaagtttcaacaggttctcggttcacgagtgcatcaccgaagcagccgcgaaaaag
gtatttgctgatgcaagagttgcccattactgggaccttgcggttaatttctctgagaat
gatttttga
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