Gossypium raimondii: 105773474
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Entry
105773474 CDS
T04129
Name
(RefSeq) WD-40 repeat-containing protein MSI4 isoform X1
KO
K10752
histone-binding protein RBBP4
Organism
gra
Gossypium raimondii
Pathway
gra03082
ATP-dependent chromatin remodeling
gra03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105773474
03083 Polycomb repressive complex
105773474
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gra03036
]
105773474
Chromosome and associated proteins [BR:
gra03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
105773474
Histone modification proteins
HAT complexes
HATB complex
105773474
HDAC complexes
Sin3A-HDAC complex
105773474
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
105773474
PRC2.2
105773474
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
105773474
Heterochromatin formation proteins
Other heterochromatin formation proteins
105773474
Chromatin remodeling factors
NuRD complex
105773474
NuRF complex
105773474
NuRF complex (fruit fly)
105773474
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
CAF1C_H4-bd
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EML
WDR55
EIF3I
Beta-prop_DCAF12
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
Beta-prop_HPS5
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
105773474
NCBI-ProteinID:
XP_012450880
UniProt:
A0A0D2V7D0
LinkDB
All DBs
Position
6:complement(12184052..12190045)
Genome browser
AA seq
489 aa
AA seq
DB search
MESSQPQQQQGPKKRGRKPKPKDEKEQQQQQQSAGKMKEGKKAQQPSVDEKYTQWKSLVP
VLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVPNTLVIANCEVVKPR
VAAAEHISQFNEEARSPFVKKYKTLIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEA
QPNRHAVLGATHSRPDLILTGHQDNAEFALAMCPTEPYVISGGKDKSVVLWSIQDHISGG
SIVKQNKPGEGNDKTAEGPSVGPRGIFCGHEDTVEDVAFCPSSAQEFCSVGDDSCLILWD
ARVGTGPTIKVEKAHDADLHCVDWNPHDDNLILTGSADNTVRMFDRRNLTSNGVGSPIYK
FEGHRAAVLCVQWSPDESSVFGSSAEDGLLNIWDYDKVGKKVERPSKSPSTPAGLFFQHA
GHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPEEEVLAELEKFKS
HVISCASKP
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggagtcttcccaaccccaacagcaacaagggcccaagaagagaggccgaaaaccgaag
ccgaaggacgagaaagaacagcagcaacagcaacaaagtgcgggtaaaatgaaagaagga
aagaaagcccaacaaccaagcgttgatgagaagtacactcaatggaagtctttggtccct
gttctctatgactggcttgctaatcacaatctcgtttggccttctctctcttgccgctgg
ggaccgcagcttgagcaagctacctacaagaatcgacagcgtctctacctctcagagcag
acggatggtagtgttccaaatacgcttgtgattgcaaattgtgaagttgtcaaacctagg
gttgctgctgctgaacacatatctcagtttaatgaagaagcacgctcaccatttgtgaag
aagtacaagacccttatacatcctggagaggtgaacagaattagagaacttccacagaac
tctaagattgttgccacacacactgatagtccagatgttcttatttgggatgttgaagct
caacccaaccgtcatgctgtccttggagctacacattctcgcccagatttgattttgact
ggacatcaagataatgcggaatttgctctcgcaatgtgtcccaccgaaccctatgtgatc
tctggagggaaggacaaatcagtggtattgtggagtatccaggaccacatatctggtgga
tcgattgtcaaacagaacaagcctggggaaggtaatgataaaacagctgaaggaccttct
gtaggtcctcgtggtatcttctgtgggcatgaggataccgttgaagacgttgcattctgt
ccatccagtgcacaggagttttgtagtgtaggcgatgattcctgcctcatattatgggat
gcacgagttggcactggccccactatcaaggttgaaaaggcacatgatgctgatcttcat
tgtgttgattggaacccccatgatgataatcttatcctgactgggtctgcagataatact
gttcgtatgtttgatcgaagaaatctcacttctaatggagttggatcaccaatttataag
tttgagggtcatagagctgctgttctgtgtgtgcagtggtcaccagacgagtcatctgta
tttggtagttcagccgaggatggcctcttaaacatttgggattatgacaaggtgggcaaa
aaggtggaacgtccttcaaaatcgccaagtactcctgcaggactctttttccagcatgct
ggccacagggacaaagtcgtcgacttccattggaatgcatctgatccatggactgttgtt
agtgtatctgatgactgtgatagcaccggtggaggagggacattacagatatggcgaatg
agtgatctgatctacaggccagaggaggaggttttggcagagctggagaaattcaagtcc
catgtcatttcatgcgcctcaaagccatga
DBGET
integrated database retrieval system
