Gossypium raimondii: 105773537
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Entry
105773537 CDS
T04129
Name
(RefSeq) oligouridylate-binding protein 1B
KO
K13201
nucleolysin TIA-1/TIAR
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gra03019
]
105773537
03041 Spliceosome [BR:
gra03041
]
105773537
Messenger RNA biogenesis [BR:
gra03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
105773537
Spliceosome [BR:
gra03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
105773537
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_5
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
105773537
NCBI-ProteinID:
XP_012450979
UniProt:
A0A0D2RCK9
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Position
6:59026804..59032396
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AA seq
422 aa
AA seq
DB search
MQHQRLKQQQQALMQQALIQQQSLYHPGILAPPQIEPIPSGNLPPGFDPSTCRSVYVGNI
HTQVTEPLLQEVFASTGPVEGCKLVRKEKSSYGFIHYFDRRSAALAILSLNGRHLFGQPI
KVNWAYASGQREDTSGHFNIFVGDLSPEVTDAMLFACFSVYPSCSDARVMWDQKTGRSRG
FGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGVSSSDDKQSSDAKSVVELTNGSS
EDGKETTNNEAPESNPQYTTVYVGNLAPEVTQVELHYHFHALGAGLIEEVRVQRDKGFGF
VRYGTHAEAALAIQLGNTHSFLCGKQIKCSWGSKPTPPGTSSNPLPPPAATPLAGLSATD
LLAYERQLAMNKMGGVHALMHPQGQHPLKQAAMGVGAAGASQAIYDGGFQNVAAAQQLMY
YQ
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaccagaggctgaagcaacagcaacaagccttgatgcaacaagctcttatccaa
caacagtctctttatcacccaggcatcttagctcctcctcagatagagccaatcccaagt
ggaaatctgcctcctggttttgatccaagtacttgccgcagtgtgtatgttggaaacatc
catacacaagtgactgaaccactactccaagaggtttttgcaagtaccggtcccgttgaa
ggctgcaagcttgtcagaaaggaaaagtcatcatatggattcatccactacttcgaccgc
agatcagctgctcttgccatattatctctaaatggaaggcatttatttggacagcctatc
aaggtcaattgggcatatgctagtggtcagagagaggatacatcaggacactttaacatt
tttgttggggatctcagtcctgaggttactgatgcaatgctgtttgcgtgcttttctgtc
tatcctagttgttcggatgcgagggtaatgtgggatcagaaaactgggcgttcaagagga
tttgggtttgtttcatttcgcaaccagcaggatgcacaaagtgcaattaacgacttaact
ggaaaatggcttggcagtcgacaaattcgttgtaactgggcgacaaagggtgtcagtagc
agtgatgacaagcagagctctgatgccaaaagcgtggtagaactaaccaatggctcatca
gaggatggtaaagagacgaccaataatgaggctcctgagagtaatcctcaatatactacg
gtttatgtcggcaatcttgctccagaggtcactcaagtagaactccactatcacttccat
gctcttggtgctgggttgattgaggaggtccgtgtccagcgtgataaaggctttggcttt
gtgagatacggtactcatgctgaggcagctttggctattcaactggggaacacacactca
tttctatgtggcaagcaaattaagtgttcttggggcagcaagcctacaccacctgggaca
agttcaaacccccttcccccacctgctgccacacctttagctggtctttctgccactgac
cttttagcttacgagcgacaactagccatgaacaaaatgggtggtgttcatgcactaatg
caccctcaaggacaacaccctctcaaacaagcggcaatgggagtcggtgctgctggagca
agccaggccatatatgacggtggattccagaacgtggcggctgcccagcaactaatgtac
tatcagtga
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