KEGG   Gossypium raimondii: 105773661
Entry
105773661         CDS       T04129                                 
Name
(RefSeq) pre-mRNA-splicing factor SPF27 homolog isoform X1
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
gra  Gossypium raimondii
Pathway
gra03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gra00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105773661
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:gra03041]
    105773661
   03400 DNA repair and recombination proteins [BR:gra03400]
    105773661
Spliceosome [BR:gra03041]
 Complex B
  Other components
   Prp19 complex
    105773661
 Complex C
   Prp19-CDC5 complex
    105773661
DNA repair and recombination proteins [BR:gra03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    105773661
SSDB
Motif
Pfam: BCAS2 TipAS
Other DBs
NCBI-GeneID: 105773661
NCBI-ProteinID: XP_012451185
UniProt: A0A0D2VAF2
LinkDB
Position
6:35064404..35071592
AA seq 254 aa
MGGNGEEILMLEAPPETARPWASASAAQTLDALPYIDDDYGNPMVKEEVDRLVEEEMRKS
IKKPADFLKDLPPLPSFNFQHHPMIGKEYERVRAGRPPVTLDFSSRYQVESPPMNKRNDE
TAWKQALQRAQRSLQHQVIRLENLELMLKYGPDVWRQSNQRLEGFLASRMQKLAQQQNEK
IETVNRERKFHQQNSAYELNALSTQWKDLCLKNIEIHAACSHIEKHIAELRREAAERGWN
LEANLENGALSPST
NT seq 765 nt   +upstreamnt  +downstreamnt
atgggcggcaacggcgaagagatccttatgttggaggcaccgcctgaaactgctcggcca
tgggcctctgcttccgctgcccagactttggacgcattaccctacattgacgacgactac
gggaacccaatggtcaaggaagaggttgatcgattggtcgaagaagagatgcgaaagagt
atcaagaagccggctgacttcctcaaggatttaccccctcttccctccttcaattttcag
catcacccaatgattggcaaagaatatgagcgcgtcagagcgggtaggccacccgtgacc
cttgatttttcttcacggtatcaagttgaatcaccgcccatgaataagagaaacgatgaa
actgcttggaaacaggcacttcaaagagctcagcgctcattgcaacatcaagtaattagg
ttggaaaatttggagttgatgttaaaatatggccctgatgtttggagacagagcaaccaa
cgactggaagggtttttggccagcagaatgcaaaaactagctcaacagcaaaatgagaaa
attgaaactgtaaaccgtgaaagaaaatttcatcagcaaaactctgcatatgagctcaat
gctttgtccacgcaatggaaggatctttgtctgaaaaacattgaaattcatgctgcttgt
tctcatattgaaaagcatatagcagaactgaggagagaagctgctgagagaggctggaac
ttggaagctaatttggagaatggtgctttgtcaccttcaacatag

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