KEGG   Gossypium raimondii: 105773699
Entry
105773699         CDS       T04129                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
gra  Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:gra00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:gra03036]
    105773699
   03400 DNA repair and recombination proteins [BR:gra03400]
    105773699
Chromosome and associated proteins [BR:gra03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    105773699
DNA repair and recombination proteins [BR:gra03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     105773699
SSDB
Motif
Pfam: MMS19_N MMS19_C HEAT_EZ
Other DBs
NCBI-GeneID: 105773699
NCBI-ProteinID: XP_012451235
UniProt: A0A0D2RCE6
LinkDB
Position
6:complement(58666031..58675302)
AA seq 1152 aa
MAEPIQLSRYIESFVDSSRSPTQQAASLEAIASLLKNNQLTIETLVREMEGYLTTVDNII
RARGILLLGEVLVRLASKPLGDATIHSLIGFFTDRLADWRALRGALVGCLALMRRKSSGG
MVSGSDAKAVAESYLQNLQVQSLGQFERKLSFELMECLLERYPNAVASLGDTLIYGICES
VDGEKDPHCLMLTFHIIEVLSRLFPDPSDALAGFAHELFEILGCYFPIHFTHQKDEDMTI
KRDDLARALMLAFSSTPLFEPYAIPLLLEKLSSSLPSAKLDSLRYLTDCTMKYGADRMAK
HIEAIWSSLKEAIFISLDSVLLFTPESLEGPDLPKNEIAAEALSLLQKLIVQNTKLFLDL
IVGDEDISMIFNTISNYKNYHEIPLERKQRLNAVGRILFTTAKASQVSCNRVFECFFSRL
MDILGLSARNSSGQPYFDESILISKRCNHGALYLSIEILSACRDMIASSETILAATSHTE
ETWKYLLQSFSPALTMGFCSAFICSSEGTHDAATYIGVKGLLILATFPGGYSLISKTVFE
KILVMFVSIINEEYSKRLSWKLALKALGEIGSFIERYHESEKEPSYMDIVVEKILSLAFV
GDFGIPFPLRLEALSDIGTSGRSYMLKVVQGLEEAIYANLYEVYVHGSTSSAEIVTHILK
CYSDKVIPWVHCEKGFEEVLLQFAINIWNQIENSTHFNASQTNKKGVLDVMMKAMKLAVA
NCSEEKQNIIVQKSYNILSSSISFPLEELLLQERFQIAQEVDNSSSRDEWILSLFAAVTI
AVHPQTHIPNTRSIVSLFMTTLLKGNVVAAQALGSMVNKLDLKSTRGQTSSDCTLEEAMD
IILNLSLWIFDTNSSSSIQSKTISVHDTGLNDLSNGVGSCNSLQIHAILGLAWIGKGLLM
RGHEKVNDITMVFLRCLQSSGRAGISHQEKSISENNYKLDLHNSVMKTAADAFQILIGDC
EQCLNREFHAIIRPLYKQRFFSTIMPVLQSLVMKLEPLSRSFLFRASAHVIIDTPLIVVL
SDTKKVIPMLLDGLSVLSNDVVDKDVLYGLLLVLSGILMDKNGQEAVSDSAHTVVNCLVD
LTRYPHMTLVRETAMQCLIAISGLSHARIYPMRTQVLQAVIKALDDPKRAVRREAVRCRQ
AWASIASRSLHF
NT seq 3459 nt   +upstreamnt  +downstreamnt
atggcggaaccgattcaactcagtcggtacattgaatcgtttgttgattcgtctcgttct
ccgactcagcaggctgcaagtttggaggccattgcttcattgttgaagaataatcagtta
acaatagaaacactggttagagagatggaaggatatttgaccaccgtggacaacattatt
cgtgcaagaggcatcctccttcttggagaagttcttgtgcgccttgcatcaaagccattg
ggtgatgctactattcatagcttgataggatttttcacggacagattggcagactggaga
gctttacggggagcgcttgttggctgtttggctctgatgagaaggaaaagcagtggtggt
atggtcagtggaagtgatgcaaaagcagttgcagagtcctatttacagaatctacaagta
cagtctcttgggcaatttgaacggaagcttagctttgaacttatggaatgcctgctagaa
cgctaccccaatgctgttgcttcacttggtgatacccttatatatggaatctgtgaatct
gttgacggagaaaaggatcctcactgtttgatgttaacatttcacattattgaggttcta
tcgcgactattccctgatccatctgatgcccttgctggatttgctcacgaactttttgag
attttgggctgttattttcccattcatttcactcatcaaaaagatgaagatatgactatc
aaaagggatgatctcgcaagagcattgatgctagcattttcatccacaccactttttgag
ccatatgccattccattactacttgaaaagctttcatcttcacttccatcagcaaagctt
gattctttgaggtatctaactgattgcacaatgaagtatggagcagacagaatggcaaaa
cacattgaagctatttggtcttcattaaaagaagcaatatttatttcacttgacagtgtt
ttattgttcactccagaatcccttgaaggtccagatcttccaaaaaatgaaattgcagca
gaggctctaagtcttttacagaagcttattgtgcagaacacaaaattgtttttggattta
attgttggtgatgaagacataagtatgatcttcaatacgatatctaattataagaattac
cacgaaattcctttagagaggaagcagagactgaatgcagttggtcgtatcctttttacc
actgctaaggcttcacaagtgtcatgcaatagagtttttgaatgtttcttcagccgattg
atggatattctgggtctttctgctagaaactcatctggacaaccatattttgatgagagt
attttgatttccaaaagatgtaatcatggagctctctatcttagcattgagatcctttca
gcatgccgagatatgattgctagttctgaaacaatcctagcagctacttctcatacagaa
gaaacatggaagtatttgcttcaaagcttttctcctgcacttactatgggcttctgttct
gccttcatttgcagtagtgaaggtactcatgatgccgctacatacattggagtaaagggg
ttgctgattttggctaccttccctggaggctattcgctgatatcaaaaactgtgtttgag
aagatcttagttatgtttgtatccattattaatgaggagtatagcaagagactatcatgg
aaactggcacttaaagcactgggggagattggctcatttatagaaagataccatgaatct
gaaaaggaaccaagctatatggacattgttgttgaaaaaattctttcattggcttttgtg
ggagattttggcataccgtttccactcagactggaagcactctcagacattggcacaagt
gggcgaagttatatgctgaaagttgttcaagggttggaagaagccatatatgccaattta
tatgaggtttatgtccatggaagtacaagttcagcagaaattgttactcacattttgaaa
tgctattctgataaggtgattccatgggtacattgtgaaaagggttttgaagaagttcta
ttgcaatttgctattaatatttggaaccaaattgagaatagcacgcacttcaatgctagt
caaaccaacaaaaagggagttcttgatgtgatgatgaaagcaatgaaacttgctgttgca
aattgttcagaggaaaagcaaaacataattgtgcaaaagagttacaacatactttcatca
agcatttcttttccattggaggagctgttgctgcaggaaaggtttcaaattgctcaagaa
gtggataatagttccagtagagatgaatggattctttcactttttgctgcagtgactata
gcagttcatcctcaaacccacattccgaatacaagatcaatagtttctctgttcatgaca
acccttctcaagggtaatgttgtagcagcccaagcattgggctctatggttaacaaattg
gatctaaaatccacgagaggacaaacttcaagtgattgtaccttggaggaagcaatggat
ataattcttaacttgagtttgtggattttcgacacgaatagctcctccagtattcaatcc
aaaacaatcagtgtccatgatacaggtttaaatgatttatctaatggtgttggaagttgt
aactcccttcaaattcatgccattttgggacttgcatggatagggaaaggtttgcttatg
cggggccatgaaaaggttaatgacattactatggtctttttacggtgtttacagtcaagt
ggaagagcaggtatatctcatcaggaaaagagtatctcggagaacaattataagcttgat
ttgcataattctgtgatgaaaactgcagcagatgcgtttcagatccttataggtgactgt
gaacagtgtttgaatcgggaattccatgcaataatacgacctctatataagcaacgattt
ttctcaacaataatgcctgttttgcaatctctagttatgaaattggaaccactctcaagg
tcttttctatttcgggcttctgcacatgttattatagatactccactaattgttgtctta
agtgacaccaagaaggtaattccaatgctactggatggtttatctgtattaagcaatgat
gttgtggataaagatgttctttatggtctcctactggtcttgtctggaatattgatggac
aaaaatggtcaagaagctgtttctgatagtgcgcatacagtcgtcaattgtctcgttgat
cttacacgataccctcatatgacgcttgttcgtgagacagccatgcagtgtctcattgcc
atttctgggctatcccatgcaaggatttatccaatgagaactcaggtactacaagctgta
ataaaggctcttgatgatccgaagagagccgtccgtcgtgaagctgtccgatgcagacaa
gcatgggcatcaattgcatcaagaagtctccatttctaa

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