KEGG   Gossypium raimondii: 105773807
Entry
105773807         CDS       T04129                                 
Name
(RefSeq) histone deacetylase 19
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
gra  Gossypium raimondii
Pathway
gra03082  ATP-dependent chromatin remodeling
gra03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:gra00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    105773807
   03083 Polycomb repressive complex
    105773807
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:gra03036]
    105773807
Enzymes [BR:gra01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     105773807
Chromosome and associated proteins [BR:gra03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     105773807
   HDAC complexes
    Sin3A-HDAC complex
     105773807
    BRAF-HDAC complex
     105773807
    REST complex
     105773807
    SHIP complex
     105773807
    MiDAC complex
     105773807
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     105773807
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    105773807
  Chromatin remodeling factors
   NuRD complex
    105773807
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 105773807
NCBI-ProteinID: XP_012451399
UniProt: A0A0D2Q6F8
LinkDB
Position
1:954028..958324
AA seq 499 aa
MDTGGNSLPSGPDGVKRKVSYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQ
VYKPLPARERDLCRFHADDYVNFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQT
YAGGSVGGAVKLNHNICDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHQRVLY
VDIDIHHGDGVEEAFYTSDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKYYSLNVPLDDGI
DDESYHFLFKPIIGKVMEVFKPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFN
VPLLLLGGGGYTIRNVARCWCYETGVALGTEVDDQLPQHEYYEYFGPDYTLHVAPSNMEN
KNTRQLLEEIRNNLLDNLSKLQHAPSVQFQERPPDTELPEADEDQDDADERWDPDSDMEV
DEKRPIPSRVKREAIEPERKDSEAPKGTAEQARGFDNMATNETLSTKSVDVRPMAIDEPT
VKVEQETSNKASDPIYPKS
NT seq 1500 nt   +upstreamnt  +downstreamnt
atggacacgggagggaattcattaccgtcgggacccgacggcgtgaagaggaaagtgtcg
tatttttacgatccggaggtcggcaattactattacggccaaggtcatcctatgaaacct
catagaatccgaatgacgcatgcccttttagcacactatggattgcttcaaaatatgcaa
gtttacaagccattacctgctcgagaaagagacctttgccgtttccatgccgatgattat
gtgaattttcttcgcagtataacgccggaaacacagcaagatcagctccggcagcttaag
cggtttaatgtcggtgaggattgtccggtttttgatggccttttctcgttttgtcaaacg
tatgcaggtggatctgttggtggtgctgttaaattaaaccataatatttgtgatattgcg
attaattgggctggtggcttgcatcatgcgaagaaatgtgaagcttctgggttttgttat
gttaatgatattgttcttgctatattggaacttcttaagcagcatcagcgtgttctatat
gttgatatcgatatccaccatggagacggtgtggaggaggcattttatacaagtgacagg
gtcatgactgtttcttttcataaatttggcgattatttccctggcacgggggatatacgt
gatattggatattcaaaagggaaatactattcccttaatgttcctttggatgatgggatc
gatgacgagagttaccatttcttgtttaagccaattattggtaaagttatggaagttttt
aagcctggtgcagttgtccttcaatgtggtgctgactccttatctggagatcggttgggg
tgtttcaatctttcgatcaagggtcatgctgaatgtgttaaatttatgagatctttcaat
gttccattgttactattaggtggtggtggttataccattcggaatgttgctcgttgttgg
tgctatgagactggagttgcactcggaacggaagttgatgatcagctgcctcaacatgaa
tattatgaatatttcggtccggattatacacttcatgttgcccctagtaacatggaaaac
aagaacacacgccaattacttgaagaaatacgtaataatctactcgacaatctctcaaag
cttcagcatgcaccaagtgtccaatttcaagaaagaccacctgacactgagcttcccgag
gccgatgaagatcaagatgatgcagatgaaagatgggacccggattcagacatggaggtt
gatgagaagcggccaatccctagcagagtaaagagagaagcaattgaacccgagagaaaa
gattcggaggctccgaaaggcactgcggagcaagctagaggtttcgacaacatggcaaca
aatgagaccctaagtacaaagtctgtagatgtcaggcctatggctatcgatgaaccaact
gtgaaagttgagcaagaaacatcgaacaaagcatctgatccaatatacccgaagtcttaa

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