Gossypium raimondii: 105773961
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Entry
105773961 CDS
T04129
Name
(RefSeq) uncharacterized protein LOC105773961
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gra03016
]
105773961
Enzymes [BR:
gra01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
105773961
Transfer RNA biogenesis [BR:
gra03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
105773961
Prokaryotic type
105773961
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
GAS2
Motif
Other DBs
NCBI-GeneID:
105773961
NCBI-ProteinID:
XP_012451661
UniProt:
A0A0D2VD18
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Position
6:55506909..55509493
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AA seq
601 aa
AA seq
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MDTSDTPVTKTATSPPQQQEPDPKRLKMSTTTTSEDEDAAATTTDTKKPRYKRRKIAMFF
AYCGVGYQGMQKNPGAKTIEGDLEEALFHAGAVPEQDRGNPKRYDWARSARTDKGVSAVG
QVVSGRFYIDPPGLVERLNQILPTQIRIFGYNRATASFSAKKFCDRRRYVYLIPVFALDP
SCHRDRESVLSSLGSGNELVKCLECSERGRKVIGVMGKRSSFEPKSTIVQHGISSNNLDA
ENVMKEDNLTSQLKEEVTEMDDSGVVEVKVNVAKSTIVQPDISSNIGDAEGAIKEDNLTS
ELKEEVTEMDDSGVVADKVNVAKWTIVQCGISSNIGDAENAIKEDNLTSELKEEVTERVD
SLVVEDKVNVEKKEERRFFYGEEEKKRFNKILNYYVGSHNFHNFTTRTKADDPAARRYIV
SFHANTVVTVEGIDFVKCEVVGQSFMLHQIRKMIGMAVAVMRGCAPESLIETALRKDVHI
NIPTAPEVGLYLDECLFSSYNQKWKDSHEELSMKAYEEEAEEFKMKFIYSHIASTEREEG
VVGLWLHSLNHRNYPDLRAGSGDSVEGKKSPKVDDKADTVEEESNVVEKNSDTAEMRSAE
E
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggacacttcagataccccagttaccaaaaccgctacatcgccgccgcagcagcaagag
cctgaccctaaaaggctcaaaatgtctaccaccaccacgtccgaagacgaagatgccgcc
gccacgacaaccgacaccaaaaaaccgagatacaaacgccgcaaaatcgccatgttcttt
gcctattgcggtgtcggatatcaaggaatgcaaaaaaacccaggagccaaaaccatcgaa
ggtgacctcgaagaagcgctattccacgctggcgctgtccccgagcaagatcgtggcaac
ccaaaacgttacgactgggcgcggtcggcccgaaccgataagggcgtaagcgccgtgggc
caggtcgtttctgggcggttctacatcgaccctcctggcctcgtggagcgtcttaatcag
atacttccgacccagattcggatattcgggtataaccgtgcgacggcctcttttagcgcg
aagaagttttgtgatcgacggcggtatgtttatcttatcccagtttttgctcttgatcca
agttgtcatcgagatagggaaagtgttttgtctagtttggggtccggtaacgagcttgtc
aagtgcttggagtgttcggaaagaggccgcaaagtaataggtgttatgggcaagcgtagt
agttttgaacccaagtcgactatagttcagcatggcatttcatcaaacaatttagatgca
gaaaacgtaatgaaggaagataacctgacatctcaacttaaggaggaggttactgaaatg
gatgattctggggttgtggaagttaaagttaatgtagcgaagtctacaatagttcagcct
gacatttcatcgaacattggagatgctgaaggtgcaattaaggaagataacctaacatct
gaacttaaggaggaggttaccgaaatggatgattctggggttgtagcagataaagttaat
gtagccaagtggacgatagttcagtgtggcatttcatcaaacattggagatgctgaaaat
gcaatcaaggaagataacctgacgtctgaacttaaggaggaggtcaccgaaagggttgat
tccttggttgtggaagataaagttaatgtagaaaagaaagaggaaagaagatttttttac
ggtgaggaagaaaagaagaggttcaataaaatattgaattactatgtcgggtctcacaac
ttccataacttcactacaagaacaaaagctgatgatcctgctgcacggcgctatattgtt
tcatttcatgcaaacacagttgtcactgtggagggcattgattttgttaagtgtgaggtt
gtggggcagagcttcatgcttcatcagattcgaaagatgattggtatggcggttgcggtc
atgaggggttgtgctcctgagtctcttatcgaaactgcattgcgaaaggatgtacacatc
aacatacctacggcgcctgaggttggtttgtatttggatgaatgcctcttttcatcatat
aaccaaaaatggaaagatagtcacgaagagttgtctatgaaagcttacgaagaagaggcg
gaggaattcaagatgaagtttatatattctcacatcgcctccacagaacgtgaggaagga
gttgtgggcctgtggttgcattctctaaaccacagaaactatcccgatttacgagccggc
agtggagactcagttgaagggaagaagagtcctaaggttgatgataaagcagacactgtt
gaagaggaaagtaatgtagtggagaaaaacagtgatactgctgagatgcgaagtgccgaa
gagtag
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