KEGG   Gossypium raimondii: 105774056
Entry
105774056         CDS       T04129                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
gra  Gossypium raimondii
Pathway
gra03020  RNA polymerase
gra03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:gra00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    105774056
  09124 Replication and repair
   03420 Nucleotide excision repair
    105774056
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gra03021]
    105774056
   03400 DNA repair and recombination proteins [BR:gra03400]
    105774056
Transcription machinery [BR:gra03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     105774056
DNA repair and recombination proteins [BR:gra03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      105774056
SSDB
Motif
Pfam: RNA_pol_Rpb4
Other DBs
NCBI-GeneID: 105774056
NCBI-ProteinID: XP_012451830
UniProt: A0A0D2SVM1
LinkDB
Position
6:52788771..52791984
AA seq 217 aa
MSEKGGRMFSLPTKTTPKSSLKSTAGKDDNSAKSKRGRKVQFGTEGSPDVNFSSPKSDGK
FATPFGKGGKGEKAANGGKTHVAKESQSLELRVEQELPENVKCLMDCEAASILEGIQDQM
VILSSDPTIKLPESFGSGLQYAKTGSYYTNPQSVRKVLQSLTKYGVSNSEICVIANTCPE
TVDEVFALVRSLEAKRSKLTGPLKDVLEELAKLKTST
NT seq 654 nt   +upstreamnt  +downstreamnt
atgtcggagaagggtggcagaatgttctccttgcccaccaaaacaacacccaaatcttct
ctcaaatccaccgctggaaaagatgataattcagcaaaatcaaagaggggaaggaaagtt
cagtttggaactgaaggttcacctgatgttaatttctcatcgccaaaatctgatggcaag
tttgcaaccccttttggtaaaggtggaaaaggagaaaaggcagcgaatggtggaaagact
catgtggccaaagaatcacagtcattggagctcagagttgaacaggaacttccagaaaat
gttaaatgccttatggactgtgaggctgccagtatcttagaaggcattcaggatcaaatg
gttatactctccagcgatccaactattaagctccctgaatcatttggttcaggactgcag
tatgccaagactggtagctattataccaatccccagtctgttagaaaagttcttcaatct
cttacaaaatatggtgtctctaacagtgagatttgtgtgattgccaatacttgtccagaa
actgttgatgaagtttttgctcttgtccgatccttggaggctaagagaagcaaactcact
ggaccacttaaagatgtattggaagagctagctaaacttaaaacatcaacctaa

DBGET integrated database retrieval system