Gossypium raimondii: 105774091
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Entry
105774091 CDS
T04129
Name
(RefSeq) ubiquitin receptor RAD23b
KO
K10839
UV excision repair protein RAD23
Organism
gra
Gossypium raimondii
Pathway
gra03420
Nucleotide excision repair
gra04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
105774091
09124 Replication and repair
03420 Nucleotide excision repair
105774091
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
gra03051
]
105774091
03400 DNA repair and recombination proteins [BR:
gra03400
]
105774091
Proteasome [BR:
gra03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
105774091
DNA repair and recombination proteins [BR:
gra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
105774091
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
CUE
UBA_3
Dsc3_N
TECR_N
Ubiquitin_4
Motif
Other DBs
NCBI-GeneID:
105774091
NCBI-ProteinID:
XP_012451888
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Position
6:47736646..47740534
Genome browser
AA seq
373 aa
AA seq
DB search
MKLTVKTLKGSHFQITVNPNDTVMAVKKNIEGIQGKDNYPCGQQLLIHNGKVLKDETTLA
DNKVSEDSFLVVMLSKSKSLGSAGASSAQPASSTPSTIAPVSNPTPTPEAPTQAPASMGT
TSASDAATANPNTNTYSQAASNLVAGSNLEQTIQQLMDMGGGNWDKETVTHALRAAYNNP
ERAVDYLYSGIPESAEVAVPVAHFSTNQTTETGAAPIAPVSGAPNSSPLNMFPQESLSGA
AAAGLESLDFLRNNQQFQALRSMVQSNPQILQPMLQELGKQNPQLLRQIQEHHAEFLQLI
NEPLEGSEGDVFDQAEQEMPHAISVTPAEQEAIQRLEAMGFERALVIEAFLACDRNEELA
ANYLLENAGDFED
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcaccgttaaaaccctcaagggttcccactttcaaattactgttaaccccaac
gatacggttatggctgtgaagaaaaacatagaaggtatacaagggaaagacaattatcca
tgcggccaacagcttttgattcataatgggaaggttttgaaagatgaaactactttagct
gataataaagtctccgaggatagttttcttgtcgtcatgcttagcaagagcaagtccttg
ggttcagctggggcatcatctgctcagcctgcttcttcaactccatctacaattgcacct
gtctctaatcctacccctacccctgaagctccaacacaagcaccggcttcaatgggcacc
acatctgcttccgatgctgcaacagctaatccaaataccaatacctatagtcaagctgct
tccaatttagtcgctggaagtaatcttgaacaaactatccaacaattgatggatatgggt
ggtggcaactgggacaaagaaacagtaactcatgcacttcgggctgcttataacaatcca
gagagagcagtcgattatctatattccgggattcctgaatcggcagaagtcgctgtgcca
gtggctcatttttccacaaaccaaactactgaaactggtgcagctcctattgctcctgtt
tcaggggctcctaattcatctcctttgaatatgtttcctcaggaatcactctctggggct
gctgctgctgggcttgaatccttggatttcctcagaaacaaccaacagttccaagcattg
cgttcaatggtacaatcaaacccgcaaattctacagcccatgctacaggagcttgggaag
caaaacccccagcttttaagacaaattcaagagcatcatgcagagtttcttcagctaata
aatgagcctctcgaaggttctgaaggggatgtatttgatcaagctgaacaagaaatgcct
catgctatcagtgttacaccagcagaacaggaggcaatccaacgacttgaagcaatggga
tttgagagagccctggtcattgaagcctttctggcatgtgaccggaacgaggaattggca
gcaaattacttattggagaacgccggagattttgaggattga
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