Gossypium raimondii: 105774257
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Entry
105774257 CDS
T04129
Name
(RefSeq) replication factor C subunit 4 isoform X1
KO
K10755
replication factor C subunit 2/4
Organism
gra
Gossypium raimondii
Pathway
gra03030
DNA replication
gra03410
Base excision repair
gra03420
Nucleotide excision repair
gra03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
105774257
03410 Base excision repair
105774257
03420 Nucleotide excision repair
105774257
03430 Mismatch repair
105774257
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gra03032
]
105774257
03036 Chromosome and associated proteins [BR:
gra03036
]
105774257
03400 DNA repair and recombination proteins [BR:
gra03400
]
105774257
DNA replication proteins [BR:
gra03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
105774257
DNA Replication Termination Factors
ELG1-RFC complex
105774257
Chromosome and associated proteins [BR:
gra03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
105774257
DNA repair and recombination proteins [BR:
gra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
105774257
Check point factors
HRAD17(Rad24)-RFC complex
105774257
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_lid_RFC1
RCF1-5-like_lid
AAA_22
RuvB_N
Rad17
Mg_chelatase
AAA_5
AAA_16
AAA_11
AAA_2
SLFN-g3_helicase
AAA_14
AAA_assoc_2
nSTAND_NTPase5
AAA_24
ResIII
nSTAND3
AAA_28
AAA_25
PhoH
AAA_19
AAA_7
AAA_30
DNAX_ATPase_lid
HK_RR_C
RNA_helicase
Parvo_NS1
DUF815
AAA_18
NPHP3_N
bpMoxR
TIP49
NB-ARC
Motif
Other DBs
NCBI-GeneID:
105774257
NCBI-ProteinID:
XP_052488095
LinkDB
All DBs
Position
6:complement(6019723..6023323)
Genome browser
AA seq
342 aa
AA seq
DB search
MAPVLQSSQPWVEKYRPKQVRDVAHQDEVVRVLTNTLETANCPHMLFYGPPGTGKTTTAL
AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSAQRQGGYPCPPFKIII
LDEADSMTEDVQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSDEIMS
SRILHICDQEGLNLDSEALSTLSSISQGDLRRAITYLQGAARLFGSSISSKDLLSVSGVI
PVEVVEALYAACKSGNFDLANKEVNNIIAEGYPVSQMLSQLFDVVVEADDVPDEQKARIC
KSLAEADKRLVDGADEYLQLLDVASNTMRALCNMPQEFSFET
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggcgccagtactgcagagctcccaaccttgggttgaaaaatatcggccaaagcaagtg
agagatgtggcacatcaagacgaggttgttcgagttctcaccaacaccctcgagaccgcc
aattgcccgcatatgctcttttacggtccgcctggcactggcaaaaccactaccgctctc
gccattgcccaccagctatttggacctgaactctacaaatctagggtgttggagctaaat
gcaagcgatgaccgtgggatcaatgttgttcgtacaaagatcaaagattttgctgctgtt
gctgtaggatctgctcagcgtcaggggggttatccctgcccaccattcaagatcattatt
cttgatgaagcagattcgatgacagaagatgtgcagaatgccttgagacgtaccatggaa
acttactcaaaagttacacgcttctttttcatatgtaactatataagcaggatcatagag
ccacttgcttcaagatgtgccaagttcagattcaagccactttcagatgaaatcatgagc
agtcgtatattgcacatatgtgaccaagaaggcctcaatttagattcagaggcgctttca
acattaagttccatttcacagggtgatcttcgtcgggctattacgtatttgcagggagct
gcacgcctatttggatcatcaatttcttccaaagacctacttagtgtgtcgggggttatc
cctgtggaagttgttgaagcactttatgctgcatgcaaaagtggtaactttgatttggca
aacaaggaagtcaataatataattgcagaaggctatccagtttctcagatgctttctcag
ttatttgatgtggttgttgaggcagatgatgtaccagatgagcagaaagctagaatttgc
aagagtttggctgaagcagataagcgtctagttgatggtgcggatgagtatttgcagctg
ctggatgtggccagcaacacaatgcgagctttgtgtaacatgccacaggaattctctttt
gaaacttag
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integrated database retrieval system
