Gossypium raimondii: 105774296
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Entry
105774296 CDS
T04129
Name
(RefSeq) heat stress transcription factor C-1
KO
K09419
heat shock transcription factor, other eukaryote
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gra03000
]
105774296
Transcription factors [BR:
gra03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
105774296
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GFIT
Motif
Pfam:
HSF_DNA-bind
IFP_35_N
Pde4dip
DUF2508
V_ATPase_I
Borrelia_orfA
CRA
PEP-utilisers_N
DUF5320
Motif
Other DBs
NCBI-GeneID:
105774296
NCBI-ProteinID:
XP_012452195
UniProt:
A0A0D2UAD4
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Position
6:9271873..9273360
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AA seq
340 aa
AA seq
DB search
MEADSNPKIVAPFVAKTYQMVNDPMTDVLITWGKANNSFIVIDPLDFSQRILPVYFKHSN
FSSFVRQLNTYGFKKVDPDKWEFANEWFLRGQKHLLKNIARRKHNKNPFMQLKAEDLEDE
EIVMEIARLKEEQKSLEEELQGMNKRLEATERRPQQMMEFLYKVVEDPDLLPRMMLEKER
TRQLNADKKRRLTMMPSNSSSSSLAVSNNSVKSEEEEDGHPGVISSPETGFDMENNFYRS
SYQSSPSPDQDSKELLGQNRLHEGQLMNYGCAAVTTQLPAVMVAPSVIGNGVAVSSSGAT
SVAGYGDRSGQLGYFGEMAAPWMEARPRPPYPFSLLEGGF
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggaggctgacagtaatcctaaaatagttgcgccattcgttgcgaaaacttaccagatg
gttaatgatcccatgactgacgttttgatcacatggggtaaagctaataacagtttcata
gtcatcgaccctttagatttctctcaaaggatcttgcctgtttacttcaagcatagcaat
ttttctagcttcgttcgccagcttaatacttatggtttcaagaaggtggatcccgataag
tgggaatttgcgaatgagtggttcctgcgagggcaaaagcatttgttgaagaacatagcg
agaagaaagcataataaaaatccattcatgcaactgaaagctgaggacttagaggacgaa
gaaatagtgatggaaatagcgaggctaaaagaggagcaaaagtcgttggaagaagagctg
caagggatgaacaagcgtttagaagccactgagagacgcccgcaacaaatgatggagttt
ctttacaaagtcgttgaagaccctgacctccttcctcgtatgatgctcgaaaaggaacgg
acaagacaacttaacgccgacaagaagcgacggttgacgatgatgccctccaactcatca
tcttcaagcctggccgtttctaataattcagtcaagtccgaagaggaagaagatggacat
ccaggagtaatttcgtccccagaaactggattcgatatggaaaacaacttttatcgctca
agttatcaatcatcgccgtcgcctgatcaagactcaaaagaattgttggggcaaaataga
ctacatgaggggcaactcatgaactatggctgcgccgcagtaacaactcaattaccggcg
gtgatggtggctccgtcggtgattgggaacggcgtggcggtgtcttcgtcgggggcgact
agtgtagcagggtatggtgataggagcgggcaactgggttatttcggagaaatggcggcg
ccttggatggaggcgcgtccacgaccgccttatccattttcgctattagagggtggcttt
tag
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