Gossypium raimondii: 105774318
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Entry
105774318 CDS
T04129
Name
(RefSeq) WD-40 repeat-containing protein MSI4
KO
K10752
histone-binding protein RBBP4
Organism
gra
Gossypium raimondii
Pathway
gra03082
ATP-dependent chromatin remodeling
gra03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105774318
03083 Polycomb repressive complex
105774318
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gra03036
]
105774318
Chromosome and associated proteins [BR:
gra03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
105774318
Histone modification proteins
HAT complexes
HATB complex
105774318
HDAC complexes
Sin3A-HDAC complex
105774318
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
105774318
PRC2.2
105774318
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
105774318
Heterochromatin formation proteins
Other heterochromatin formation proteins
105774318
Chromatin remodeling factors
NuRD complex
105774318
NuRF complex
105774318
NuRF complex (fruit fly)
105774318
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_EIPR1
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_EML
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_SPT8
EIF3I
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
WD40_RFWD3
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
105774318
NCBI-ProteinID:
XP_012452224
UniProt:
A0A0D2UHM9
LinkDB
All DBs
Position
6:58750084..58756801
Genome browser
AA seq
462 aa
AA seq
DB search
MKGEKGRSVEEKYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKTRQRLYLSE
QTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQ
NSKIVATHTDSPDVLIWDVEVQPNRHAVLGAADSRPDLILTGHQENAEFALAMCPTEPFV
LSGGKDKLVVLWSIHDHISTLAKEQGPTKSPGSTSTSTKHASKGGGGNDNHVEGPSVEAR
GIYQGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARAGSTPAIKVEKAHNADIHCVDW
NRHDINLILTGSADNTIHMFDRRNLSSGSPVHKLVGHSAAVLCVQWSPDKSSVFGSSAED
GILNIWDHEKIGKRQDTAGLKAPNAPPGLFFQHAGHRDKVVDFHWNTSDPWTIVSVSDDC
ESTNGGGTLQIWRMIDLIYRPVDEVLAELDKFKPHILGCEKN
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgaagggggagaaagggagatcggtggaagagaaatacactcaatggaagtctttagtc
cctgtcctctacgattggctcgctaatcacaacctcgtttggccttctctctcttgccga
tgggggccgcaactagagcaagctacttacaagacccgtcagcgtctttacctttcagaa
cagactgatggaagtgttccaaacacacttgtaatagccaactgtgaggttgttaaacct
agggttgctgctgctgagcacatatctcagttcaatgaagaagcccgctctccctttgtg
aagaaatataaaactattatacatcctggagaggtgaacagaatcagagaactcccacag
aacagcaagatagttgcgacacatactgacagtcctgatgtcctcatttgggatgtagag
gtccagcctaatcgccatgctgtgctgggagctgcagattctcgtccagatctgatattg
actggacatcaagaaaatgctgaatttgctcttgctatgtgtccaactgaaccttttgtc
ctatctggaggcaaggacaagttagtggttttgtggagcattcatgatcatatctctact
ctggcaaaggagcaagggcccacaaagtctccaggatctactagtaccagtacaaaacat
gcctctaagggtggtgggggtaatgataaccatgttgagggcccttccgtcgaggcacga
ggtatctaccaaggccatgaggatacagttgaagatgttcagttctgcccatcaagtgct
caggaattctgcagtgttggagatgattcttgtcttatattatgggatgctagagctggc
tcaactccagctatcaaggttgagaaagctcataatgctgatattcattgcgtcgattgg
aatcgtcatgacataaatctcattttgactgggtctgctgataataccattcacatgttt
gaccgccgaaacctttcctctggctcaccagttcataaactcgtgggccacagtgctgct
gtcctttgtgtacagtggtccccagacaagtcatcagtctttggaagttctgctgaggat
gggatcttaaacatctgggaccatgaaaagattgggaaaaggcaagatactgctggattg
aaggcaccaaatgctcctcctggattgttctttcaacatgcagggcatagggacaaggtt
gtggacttccattggaatacatctgatccgtggacaattgtcagtgtgtcagatgattgc
gaaagcactaatggtggtggtactctacagatatggcggatgatcgatttgatttaccgt
ccggtagacgaagtcttagccgagctagataagtttaaacctcacattctaggatgtgaa
aaaaattag
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