Gossypium raimondii: 105774566
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Entry
105774566 CDS
T04129
Name
(RefSeq) long chain acyl-CoA synthetase 6, peroxisomal isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
gra
Gossypium raimondii
Pathway
gra00061
Fatty acid biosynthesis
gra00071
Fatty acid degradation
gra01100
Metabolic pathways
gra01212
Fatty acid metabolism
gra04146
Peroxisome
Module
gra_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
105774566
00071 Fatty acid degradation
105774566
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
105774566
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
gra01004
]
105774566
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gra04147
]
105774566
Enzymes [BR:
gra01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
105774566
Lipid biosynthesis proteins [BR:
gra01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
105774566
Exosome [BR:
gra04147
]
Exosomal proteins
Exosomal proteins of breast milk
105774566
Exosomal proteins of breast cancer cells
105774566
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
105774566
NCBI-ProteinID:
XP_012452557
UniProt:
A0A0D2NH94
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Position
1:1705143..1723967
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AA seq
697 aa
AA seq
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MDSSSAERRLNAIHGHLVPVVCGGAGSHSGLRVNPTAGEFLCEQGYSVVLPEKLKTGKWN
VYRSARSPFKLVTRFPDHPDIGTLHDNFIHAVDTFRDYKYLGTRIQADGTVGEYKWMTYG
EAGTARAAIGSGLIYHGIPKGSCIGLYFINRPEWLIVDHACSAYSLVSVPLYDTLGPDAV
KYIVNHADVKAIFCVPQTLNSLLNFLSEIPSVRLVVVVGGKENEVPSLPPSTGIQIVTYT
KLLSQGRRNVQPFSPPKPDDVATICYTSGTTGTPKGVVLTHGNLIANAAGCSTGTKFYPS
DVYISYLPLAHIYERAYQVALLYFGVAVVFYQGDNMKLMDDLVALQPTIFCSVPRLYNRI
YAGIVNAVKSSGPLKERLFNAAYNSKKHAIMNGKSPSPLWDKLVFNKIKAKLGGRIRFLS
SGASPLSPDVLDFLKICFGCRVVEGYGMTETSCVISSMEEGDNLSGHVGSPSPACEIKLV
DVPEMNYTSDDQPYPRGEICVRGPIVFQGYYKDEVQTREVLDEDGWLHTGDIGLWLSGGR
LKIIDRKKNIFKLAQGEYIAPEKIENVYAKCKFIAQCFIYGDSLNSSLVAIVSVDHDVLK
AWAASEGIKYKDLGQLCNDPRARAAVLADMDALGREAQLRGFEFAKAVTLVLEPFTMENG
LLTPTFKIKRPQAKEYFAKAISNMYAELATSDPFPQN
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atggattccagctcagctgaacgtcgacttaacgccattcacggtcaccttgtccccgtc
gtatgcggaggcgccggttctcattcgggcctccgtgttaacccaaccgccggcgagttc
ctctgtgagcagggttatagtgttgtgctgccagagaaactgaagacaggaaaatggaat
gtatacagatctgctcgctctccgtttaagcttgtgactagatttcctgatcatcctgat
attggtacactgcatgataattttatacatgcggttgataccttccgagattacaaatat
cttggtacaagaattcaagcggatggtacagttggagagtacaagtggatgacatatgga
gaagctggaactgctcgggcggccataggttctggcttaatatatcatggaataccaaag
ggctcttgtattggattatatttcatcaatagaccagagtggctcattgttgatcatgct
tgctctgcgtattcccttgtgtcagttcctttatatgacacactaggtccggatgctgtc
aagtacattgttaatcatgcagatgttaaagctatattttgtgtgcctcaaacattgaat
tctttgctaaactttttatctgagattccgtccgtacgtttggttgtggtggttggaggg
aaggaaaatgaagtgccttcattgccaccgtcaactggaattcagattgtgacatataca
aaattattaagtcagggccgccgtaacgtccagcctttttccccaccaaaaccagatgat
gttgcaaccatttgctacactagtggtacaactggaacacccaagggagttgtgctgacc
catggaaacttgattgcaaatgctgctggatgcagcactggtacaaaattttacccctca
gacgtgtacatatcatatcttcctttggcacacatttatgaacgagcttatcaggttgct
ttactgtatttcggagttgcagttgtattctaccagggggataacatgaaattaatggat
gacctggttgcactacaacccacaatattttgcagtgtccctagactgtataacagaatt
tatgccggtattgtcaatgctgtgaagtcttctggtcctctgaaggagagactttttaat
gccgcctacaattccaagaagcatgcaataatgaatggaaagagtccttctcccctgtgg
gacaaattggtgttcaacaaaataaaagccaaactcggaggacggattcgtttcttgagt
tcaggtgcttcacccttgtctcctgatgtcctagacttcttgaagatttgctttggctgt
cgagtcgtggaaggttacggaatgaccgagacatcatgtgttataagcagtatggaggag
ggtgacaatctttccggccatgttggctcccctagtccggcttgtgaaataaagcttgtg
gacgtcccggaaatgaactacacatctgatgatcagccatatcctcgtggagaaatctgt
gttaggggtccaattgttttccaaggatattacaaggacgaagtgcagacgagagaagta
cttgatgaagacggatggcttcatactggagacatagggctatggttatctggaggtcgg
ctaaagattatcgataggaagaagaacatttttaagctggctcagggagagtacatagct
ccagaaaaaatcgaaaatgtatatgctaaatgcaaatttattgcacagtgttttatttac
ggtgacagcctgaattcttcattagtagctattgtctcagtggaccacgatgttttgaaa
gcatgggctgcgtctgaaggcattaagtacaaagatttaggacaactatgcaatgaccca
agagcaagggctgctgtcctggctgatatggatgctctcggaagagaagctcagctgcga
ggcttcgagtttgcaaaagctgtgaccttagtgcttgaaccattcacaatggagaatggt
ttgcttactccgacttttaagattaagagaccgcaagcaaaggaatacttcgcaaaagcg
atttcaaacatgtatgccgagctcgctacatcggatccttttcctcagaactag
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