Gossypium raimondii: 105774817
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Entry
105774817 CDS
T04129
Name
(RefSeq) rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
105774817
Enzymes [BR:
gra01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
105774817
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
EMC7_beta-sandw
Motif
Other DBs
NCBI-GeneID:
105774817
NCBI-ProteinID:
XP_012452842
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Position
6:3002864..3008355
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AA seq
636 aa
AA seq
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MSIQGVQLFIQDDHVVMDNGILQVTISKPEGIVTGVSYQGIDNLLEIRNHESDRGYWDLV
WSEEGTGGTTGTSYVIKGSKFEVTVENEEQLEISFTRDWSTSLEGKHVPLNIDKRFVMLR
GSSGFYSYAIYEHLKEWPGFNLPQTRVVFKLRKDKFRYMAVADNRQRRMPLPDDRSPRRS
SPLAYPEAVLIVHPVESEFKGEVDDKYQYSCENKDLHVHGWICNDPPVGWWQITPSNEFR
SGGPMKQNLTSHVGPINLAMFLSAHYVGEEMVPKFQRGEPWKKVFGPVFVYLNTLIDNND
PLWLWEDAKQETNTQVQCWPYNFLASDDFPKSEQRGCVSGRLRVSDRYVSNEHISVNGAY
VGLAPPGDVGSWQTESKGYQFWTKTDENGYFLINDIRAGDYNLYAWVPGFIGDYKNDTII
TITSGCDIDMGELVYEPPRDGATLWEIGIPDRTAAEFYVPDPDPKYINKLYVNHPEKYRQ
YGLWERYSDLYPNGDLVYTVGVSDYRTDWFFAQVTRKKDDGKYEGTTWQIKFNLDHINQT
GTYKLRVALATAYVAELQVRINNPKANPPLFTTGVIGHDNTITRHGIHGLYGLYSIDLKG
TLLMEGENTIFLTQPMCSSALQGLMYDYIRLEAPPS
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgtccattcaaggggtgcaattgtttattcaagatgatcatgtggtgatggataatggg
atactccaagtcacaatatcgaaacccgagggaatcgtcaccggagtaagctatcaaggc
atcgataatctgcttgaaattcgtaaccatgaatccgatagagggtactgggaccttgtt
tggagtgaagaaggaacaggaggaacaacagggacctcttacgtaataaaagggtcaaaa
ttcgaagtgacggttgaaaatgaagaacaattggaaatctcattcactagagattggagt
acttctttagagggcaagcatgtccccttaaatatagacaaaaggttcgtaatgcttcga
ggatcgtcggggttttactcatacgccatttacgaacacttaaaagagtggcctggtttc
aacttgccacaaaccagggtcgttttcaagcttagaaaagacaagtttcgctacatggca
gtggcagataaccggcaaaggcgcatgccgttaccagatgaccgatcaccaagaagaagt
agtcccctagcttatcccgaagcagtcctaattgttcatccggtcgagtcggagttcaag
ggagaggtggatgacaaatatcaatactcttgcgaaaacaaagatcttcatgttcatgga
tggatatgcaacgatccaccggtggggtggtggcaaatcacgccgagcaatgagttccga
tccggtggaccaatgaaacaaaaccttacttctcatgttggtcctataaatctagcaatg
tttttgagtgctcattacgttggggaggaaatggtgccgaagtttcaacgcggagagccg
tggaagaaagtattcggccccgttttcgtttatctcaacactttgattgacaacaatgat
cccctttggctatgggaagatgctaaacaagagacaaacacccaagtccaatgttggcct
tacaacttcctagcatcggacgattttccaaaatccgagcagcgaggttgcgttagtggt
agattacgagttagtgacaggtatgttagcaatgaacatatatcagtaaatggtgcttac
gtgggattggcgccaccaggagatgttggctcatggcaaacagaaagcaagggttaccaa
ttctggactaaaacagatgaaaatggctactttttgatcaatgatataagggctggtgac
tataatctttatgcttgggtcccaggtttcattggtgattacaaaaatgataccataatt
accataacttcaggttgtgatatcgacatgggtgagcttgtttatgaaccaccaagagat
ggggctacactgtgggaaattggaatcccagatagaactgcagcagagttctatgtacca
gatcctgatccaaagtacattaataaactatatgtgaaccaccctgaaaaatataggcaa
tatggattgtgggagagatactcagatttatatcctaatggagatttagtttacactgtt
ggtgttagtgattacagaactgattggttctttgctcaagttaccaggaagaaggatgat
ggaaagtatgaaggaaccacatggcaaatcaagttcaaccttgatcatataaaccaaact
ggaacctacaaacttcgagttgctctggcaacagcctatgttgcagaattacaagttaga
atcaataatccaaaggcaaatcccccactgtttacaacaggagtgattggacatgataac
accattacaagacatggaatccatggactgtacggtctttatagcattgatttgaaaggt
actttgcttatggaaggtgaaaacaccattttcttgactcaaccaatgtgtagcagtgca
ttacaagggcttatgtatgattatattcgtttagaagcaccaccttcttga
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