Gossypium raimondii: 105775737
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Entry
105775737 CDS
T04129
Name
(RefSeq) heparanase-like protein 2
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
gra
Gossypium raimondii
Pathway
gra00531
Glycosaminoglycan degradation
gra01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
105775737
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
gra00536
]
105775737
Enzymes [BR:
gra01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
105775737
Glycosaminoglycan binding proteins [BR:
gra00536
]
Heparan sulfate / Heparin
Enzymes
105775737
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
105775737
NCBI-ProteinID:
XP_012453660
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All DBs
Position
10:complement(60970847..60973099)
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AA seq
521 aa
AA seq
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MMNFKSITFFVVFLSCLLVSKAEKVEVVVEGATSIAQTDEDFICVTLDWWPTNKCDYDQC
PWGQAGLFNLDLKNKILEKAVKAFHPLRIRVGGSLQDQVVYNVRNNIENCQPFQKQDKGF
LFGFSIGCLDMKRWDELNEFFNQTRAKVTFGLNALIGRKESETEKTLWVGDWYSHNARDL
MSYTISKGYKIDSYELGNELCGVGVSARIEAKQYAKDMATLKNLVKEMYPNPKTQPKVLG
PGGFYDKKWFDTFLDASGHDVIDGVTHHIYNLGPGNNPDVVRRVQDPFFLTQIAQTFKDV
SNAIVKFAPWSGAWVSESGGAYNSGGQLVSYTFAFGFWYLDQLGMTSVYNHKVYCRQALI
GGNYALLNTTTFVPNPDYYGALLWHRVMGSKVLSVTHKGSPYLRVYSHCAKKEPGVSFVF
INLSKNTSFEIDLFHDLNLNGGSPNFEFKGHKKREEYHLTPKDGNILSSIVLLNGTPLEL
SDSLEIPELKPKLVDGLKPISIAAHSIAFVTIRDFNAPACS
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatttcaaaagtattacgttttttgttgtgtttttgtcctgtcttttggtctca
aaggcagaaaaggttgaagttgtggttgaaggagcaacttccatagctcaaaccgatgaa
gattttatttgtgttacccttgattggtggcctacaaacaagtgtgattatgatcaatgt
ccgtggggtcaagctggactttttaatttggatttgaagaacaagattcttgaaaaggct
gtaaaagcatttcatcctttaagaattagagttggaggttcgttgcaagatcaagtggtg
tacaacgttcgaaataatattgagaattgccaaccattccaaaaacaagacaagggcttc
ttattcggtttctccattggatgtcttgacatgaagagatgggatgaactcaatgagttt
ttcaatcaaactcgagctaaagttacatttggtttaaatgctcttatcggaagaaaagag
tccgaaactgaaaagactctttgggttggtgattggtattcacataatgctcgggatctc
atgagttatacaatttccaaaggatataaaattgactcttatgaattaggaaatgaattg
tgtggagttggagttagtgctaggattgaagctaaacaatatgcaaaagatatggcaaca
cttaaaaatcttgtaaaagagatgtatccaaatccaaaaactcaacctaaggttttaggc
ccgggaggtttctatgacaagaaatggttcgatacttttttggatgcttcaggacatgac
gttattgatggagttacacatcatatttataatctcggacctggtaataacccagatgtg
gttcgtcgtgtccaagatccatttttcttgacccaaattgctcagacatttaaagatgtt
tcaaatgctattgtcaaatttgcaccatggtctggtgcatgggttagtgaatcgggtgga
gcttataacagtggtggccaattagtgtcttatacatttgcatttggcttttggtacttg
gaccaattgggaatgacatcagtttataaccacaaagtttattgcagacaagctttgatc
gggggcaattatgctcttcttaacactaccacatttgttcccaatccagattattatggt
gcacttttgtggcatagagttatggggagtaaagttctttccgtcacgcataagggttct
ccatatttacgtgtatactctcattgtgccaaaaaggagcccggggtttcttttgttttc
atcaacttatcgaagaatacctcatttgaaattgatcttttccatgatctaaatttaaat
ggtgggagtccaaattttgaatttaaaggacataaaaagcgagaagagtatcatttgact
ccaaaagatgggaacatcttaagcagtattgtattgctaaacggaacaccattggaactt
tcagactcgttggagataccagagttgaagccgaagcttgtggatggtttgaaacccatt
agcatcgctgctcattcaattgcatttgtaaccataagagatttcaatgcacctgcatgt
tcttaa
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