Gossypium raimondii: 105775747
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Entry
105775747 CDS
T04129
Name
(RefSeq) LOW QUALITY PROTEIN: valine--tRNA ligase, chloroplastic/mitochondrial 2
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
gra
Gossypium raimondii
Pathway
gra00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
105775747
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gra01007
]
105775747
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gra03016
]
105775747
Enzymes [BR:
gra01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
105775747
Amino acid related enzymes [BR:
gra01007
]
Aminoacyl-tRNA synthetase
Class I (U)
105775747
Transfer RNA biogenesis [BR:
gra03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
105775747
Prokaryotic type
105775747
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
Val_tRNA-synt_C
tRNA-synt_1_2
tRNA-synt_1e
DUF2046
Motif
Other DBs
NCBI-GeneID:
105775747
NCBI-ProteinID:
XP_052477883
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All DBs
Position
10:61880810..61894550
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AA seq
971 aa
AA seq
DB search
MSLHQIAVSHSFLLSSRSAYTLNPLLFSKRNRFRIXLSHSRFTSIKHRSFAVAVSDNGIF
TSPELAKSFDFTSEERIYNWWLSQGYFRPKFDWESDPFVISMPPPNVTGSLHMGHAMFVT
LEDIMVRYHRMRGRPTLWLPGTDHAGIATQLVVERMLASEGIKRVELGRDEFEKRVWEWK
EKYGGTITNQIKRLGASCDWTRECFTLDEQLSRAVIEAFIRLHEKGLIYQGSYMVNWSPK
LQTAVSDLEVEYSEEPGTLYYIKYRVAGGSRSDFLTIATTRPETLFGDVAIAVHPQDERY
SKYVGKMAIVPMTYGRHVPIISDKYVDKDFGTGVLKISPGHDHNDYVLARRLGLPILNVM
NKDGTLNEVAGLYCGLDRFEARKKLWSDLEETDLAVKMEPHSLRVPRSQRGGEVIEPLVS
KQWFVTMQPLAEKALLAVEKGELTIIPERFEKIYNHWLTNIKDWCISRQLWWGHRIPVWY
IVGKDCEEEYIVARSAEEALMKARDKYGKEVEVYQDPDVLDTWFSSALWPFSTLGWPDEL
AEDFKRFYPTTMLETGHDILFFWVARMVMMGIEFTGTVPFSYVYLHGLIRDSQGRKMSKT
LGNVIDPLDTIKEFGTDALRFTLALGTSGQDLNLSTERLTANKAFTNKLWNAGKFVLQVL
PNRDNVSGWQNIEACKFNTEGYLLRLPLPECWVVSKLHMLIDAVTESYNKFFFGDVGREI
YDFFWGDFADWYIEASKARIYHSGDDSVALVAQTVLLYVFENILKLLHPFMPFVTEELWQ
ALPNRREALIISSWPQTALPRSTDLVKRFENLQALTRAIRNARAEYSVEPAKRITASIVG
SEEVIQYISEEKEVLALLSKLDLGNIHFADSPPEDAKQSVHLIASEGLEAYLPLADMVDI
SAEVQRLTKRLLKMQTEYEGLKARLNSPKFIEKAPKDVVRGVQEKAAEAEEKINLTKNQL
AFLKSTVMLSQ
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgagtcttcaccaaatagctgtctctcattcttttctgttatcttctcgctctgcttat
actctcaatcctcttttgttctcaaaacgaaaccgttttcgcattntcctctctcactct
cgtttcacttcgataaaacataggagctttgctgtggctgtatcagacaacggcattttc
acttctccagagttggcaaagtcgtttgattttacttcggaagaacgaatatacaattgg
tggctgtctcaaggctatttcagaccaaaatttgactgggaaagtgatccttttgtcata
tcaatgccacctcctaatgttactggctctctgcacatgggacatgcaatgtttgtaact
cttgaggatatcatggttaggtaccatcgcatgaggggaagaccaacactttggcttcct
ggaactgatcatgctggcattgcaactcagttggttgtggaaagaatgttggcttctgaa
ggaataaaaagggtagaactgggcagagatgaatttgaaaaacgagtttgggagtggaaa
gagaaatatggtgggaccattactaatcagattaagagacttggggcttcttgtgactgg
actagagaatgtttcaccctcgatgagcagctaagtcgagctgttatagaggcatttatt
agacttcacgaaaaaggattaatttatcaagggtcttacatggttaactggtctccaaag
ttacagactgctgtttcagacttggaagtagaatattctgaagagcctggtaccctctac
tatattaaatatcgcgttgctggaggttcaagaagtgatttcttaacaatagcaacaaca
aggcctgaaactctgtttggtgatgtagctatagctgtgcatcctcaggatgagcgatat
tccaagtatgttgggaaaatggcaattgttcctatgacatatggtcgtcatgttcctatc
atctctgataagtatgttgataaagactttgggactggtgtactgaagataagccctgga
cacgatcataatgattatgttctagctagaaggcttggccttcctattcttaatgttatg
aacaaggacgggacattaaatgaggttgctggactgtactgtggccttgatcggtttgag
gcacggaagaaattgtggtctgatcttgaggagactgacttagctgtgaaaatggaaccc
cacagtttaagagtaccgagatctcagcgtggcggagaggtaatagagccactagtaagc
aagcagtggtttgtaacaatgcagcccttagctgaaaaggctcttcttgcagttgaaaag
ggagaattgaccattattcctgaaagatttgagaagatttataatcattggctgacaaat
atcaaggattggtgcataagcagacagctgtggtggggacaccgcatacctgtttggtac
attgttggaaaagactgtgaagaggaatacatagttgctaggagtgctgaggaagctctt
atgaaggctcgtgataaatacggaaaagaagtagaagtttatcaggatccagatgttctt
gacacttggttctcaagtgcattatggcctttcagtactcttgggtggccagatgagttg
gcagaggattttaaaaggttttatccgacaacaatgcttgaaactggccatgatatattg
ttcttttgggttgcaagaatggtcatgatgggaatcgaattcacaggaactgttccattt
tcatatgtatatcttcatggtctaatccgtgattcacaagggcgtaaaatgtctaaaact
cttggcaatgttattgatccacttgatactatcaaggagtttggcactgatgccttgcga
ttcactcttgctttgggaacttctggtcaggatcttaatttatctactgaaaggctaaca
gcgaacaaggccttcacaaacaaattatggaatgctggcaagtttgtgctgcaggttctg
cctaatcgggataatgtttctggttggcagaatatagaggcttgtaagtttaacacggag
gggtatcttctaaggcttcctcttccagaatgttgggtggtctcaaaactgcatatgcta
attgatgctgtaactgagagttataacaaatttttctttggggacgttgggagagaaata
tatgatttcttttggggtgattttgccgactggtatattgaagccagtaaagctcgcatt
taccactctggagatgattcagttgctttagtagctcagacagttctactctacgttttc
gagaatatactgaaattattacatccattcatgccattcgtaactgaggaactgtggcag
gcacttcccaatcggagagaagctcttataatatcttcctggccacaaactgctcttccc
aggagtactgatttggtaaaaagatttgaaaatttacaagctctgactcgagcaatccgg
aatgctagagctgagtattctgttgagccagcaaagcgcataactgcttctattgttggt
agtgaagaagtcattcagtatatatctgaagagaaggaggttttggctctcttatccaag
ctagatttaggcaatattcatttcgctgattctcctccagaggatgcaaaacaatcagtt
caccttattgcaagtgaaggactggaggcatatcttccccttgctgatatggttgatatt
tctgctgaagtgcaacgccttaccaagcgcctattaaagatgcaaacggaatatgaggga
cttaaagctcgactcaactctcctaaattcatagagaaagctcccaaggatgttgtccgt
ggggttcaggaaaaagcagcagaagcagaagagaagattaatctgaccaaaaaccaattg
gctttcctgaaatcaactgttatgctttcgcaatag
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